RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LMBR1LQ6UX01 489 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 AIDAQ96BJ3 306 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 DLC1Q96QB1 1528 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 ACSBG1Q96GR2 724 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 TMOD3Q9NYL9 352 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 LTBP4Q8N2S1 1624 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 ORAI2Q96SN7 254 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 TECPR2O15040 1411 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 CCDC69A6NI79 296 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 PATL2C9JE40 543 aaKnown RBP10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 GOLGA6L1Q8N7Z2 621 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 JAG2Q9Y219 1238 aa10.72□□□□□ -0.69
SMARCA1-202ENST00000371122 ARHGEF28Q8N1W1 1705 aaKnown RBP10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 STX6O43752 255 aa10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 ZSCAN30Q86W11 494 aa10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 SMC5Q8IY18 1101 aa10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 PRIM1P49642 420 aaKnown RBP10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 MAP3K11Q16584 847 aa10.71□□□□□ -0.69
SMARCA1-202ENST00000371122 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.7
SMARCA1-202ENST00000371122 SBNO2Q9Y2G9 1366 aa10.71□□□□□ -0.7
SMARCA1-202ENST00000371122 RXRAP19793 462 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 DNM1Q05193 864 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 IFIT5Q13325 482 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 EDC3Q96F86 508 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 C16orf45Q96MC5 204 aaPredicted RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 ZNF396Q96N95 335 aaPredicted RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 KCNQ3O43525 872 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 ESYT1Q9BSJ8 1104 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 UBAC1Q9BSL1 405 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 TTC12Q9H892 705 aaPredicted RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 RANBP6O60518 1105 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 ANKRD1Q15327 319 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 DHX37Q8IY37 1157 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 POLR3AO14802 1390 aaPredicted RBP10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 ADGRB2O60241 1585 aa10.7□□□□□ -0.7
SMARCA1-202ENST00000371122 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 USP5P45974 858 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 TIMM10P62072 90 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 ZSCAN23Q3MJ62 389 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 DCTPP1Q9H773 170 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 PTPRCP08575 1304 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 CFAP100Q494V2 611 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 RBM5P52756 815 aaKnown RBP eCLIP10.69□□□□□ -0.79e-8■□□□□ 9.1
SMARCA1-202ENST00000371122 IMMTQ16891 758 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 GOLGA8BA8MQT2 603 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 USP48Q86UV5 1035 aa10.69□□□□□ -0.7
SMARCA1-202ENST00000371122 STARD3NLO95772 234 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 C8orf76Q96K31 380 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 CEP89Q96ST8 783 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 NAPBQ9H115 298 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 KDM2BQ8NHM5 1336 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 ADCY5O95622 1261 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 XBP1P17861 261 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 ZSCAN29Q8IWY8 852 aaPredicted RBP10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 NACAP1Q9BZK3 213 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 OFD1O75665 1012 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 PKP1Q13835 747 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 AMOTQ4VCS5 1084 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 TCEAL9Q9UHQ7 104 aa10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC24Q8N4L8 307 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 HYPKQ9NX55 129 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 USP16Q9Y5T5 823 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 GCP02774 474 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 IL13P35225 146 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 CBX1P83916 185 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 IFNL2Q8IZJ0 200 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 FSIP1Q8NA03 581 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 BRMS1Q9HCU9 246 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 CFAP45Q9UL16 551 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 GRM8O00222 908 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 TPM2P07951 284 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 DNA2P51530 1060 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 CCDC112Q8NEF3 446 aa10.67□□□□□ -0.7
SMARCA1-202ENST00000371122 ZNF213O14771 459 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 AK2P54819 239 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 IL16Q14005 1332 aa10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 IFIT3O14879 490 aaKnown RBP10.66□□□□□ -0.7
SMARCA1-202ENST00000371122 LTKP29376 864 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms