RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 POLKQ9UBT6 870 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 TSG101Q99816 390 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 CCDC87Q9NVE4 849 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 MAST3O60307 1309 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 YEATS2Q9ULM3 1422 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 CETN2P41208 172 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 ZNF592Q92610 1267 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 DEF6Q9H4E7 631 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 SH2D4AQ9H788 454 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 GOLIM4O00461 696 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-202ENST00000369367 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
SCAF11-202ENST00000369367 CAGE1Q8TC20 777 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 ERCC4Q92889 916 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-202ENST00000369367 C8orf76Q96K31 380 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 ADGRL2O95490 1459 aa11.47□□□□□ -0.57
SCAF11-202ENST00000369367 GOLGA8AA7E2F4 631 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 GOLGA8BA8MQT2 603 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 NCOA7Q8NI08 942 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 ERLIN2O94905 339 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 SMTNL1A8MU46 457 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 SERPINC1P01008 464 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 NLRP5P59047 1200 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 ESR2Q92731 530 aa11.46□□□□□ -0.57
SCAF11-202ENST00000369367 TRPC5Q9UL62 973 aaPredicted RBP11.46□□□□□ -0.58
SCAF11-202ENST00000369367 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.58
SCAF11-202ENST00000369367 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.58
SCAF11-202ENST00000369367 PRPF40BQ6NWY9 871 aaKnown RBP11.46□□□□□ -0.58
SCAF11-202ENST00000369367 TSPY26PQ9H489 355 aa11.46□□□□□ -0.58
SCAF11-202ENST00000369367 AMPD3Q01432 767 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
SCAF11-202ENST00000369367 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
SCAF11-202ENST00000369367 CETN1Q12798 172 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-202ENST00000369367 SLC39A6Q13433 755 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
SCAF11-202ENST00000369367 H0YIN7 160 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 TRIM27P14373 513 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 CCDC148Q8NFR7 591 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
SCAF11-202ENST00000369367 NEBLO76041 1014 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 CYP7A1P22680 504 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 TCP11L1Q9NUJ3 509 aa11.45□□□□□ -0.58
SCAF11-202ENST00000369367 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-202ENST00000369367 TMEM67Q5HYA8 995 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 COL17A1Q9UMD9 1497 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-202ENST00000369367 BMP15O95972 392 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 TSPY3P0CV98 308 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 TSPY8P0CW00 308 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
SCAF11-202ENST00000369367 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 EYA1Q99502 592 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 PIBF1Q8WXW3 757 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCAF11-202ENST00000369367 CALML4Q96GE6 196 aa11.44□□□□□ -0.58
SCAF11-202ENST00000369367 SH3TC1Q8TE82 1336 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
SCAF11-202ENST00000369367 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 FAM83GA6ND36 823 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
SCAF11-202ENST00000369367 ZNF397Q8NF99 534 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-202ENST00000369367 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
SCAF11-202ENST00000369367 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
SCAF11-202ENST00000369367 MCM5P33992 734 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 ALDH1B1P30837 517 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 MRE11P49959 708 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 TTC6Q86TZ1 520 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 VPS36Q86VN1 386 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-202ENST00000369367 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
SCAF11-202ENST00000369367 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 APBA3O96018 575 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
SCAF11-202ENST00000369367 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 CALM1P0DP23 149 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 CALM2P0DP24 149 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 CALM3P0DP25 149 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 TNNT3P45378 269 aaPredicted RBP11.42□□□□□ -0.58
SCAF11-202ENST00000369367 HSP90B2PQ58FF3 399 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 LDHBP07195 334 aaKnown RBP11.42□□□□□ -0.58
SCAF11-202ENST00000369367 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 CHMP4BP1P59074 171 aa11.42□□□□□ -0.58
SCAF11-202ENST00000369367 USP37Q86T82 979 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 VEZTQ9HBM0 779 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 NLRP1Q9C000 1473 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
SCAF11-202ENST00000369367 WTAPQ15007 396 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
SCAF11-202ENST00000369367 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
SCAF11-202ENST00000369367 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms