RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 NUP62CLQ9H1M0 184 aa20.7■□□□□ 0.9
CHTOP-203ENST00000368690 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.9
CHTOP-203ENST00000368690 MRVI1Q9Y6F6 885 aa20.7■□□□□ 0.9
CHTOP-203ENST00000368690 TYRO3Q06418 890 aa20.69■□□□□ 0.9
CHTOP-203ENST00000368690 RBM43Q6ZSC3 357 aaKnown RBP20.69■□□□□ 0.9
CHTOP-203ENST00000368690 USHBP1Q8N6Y0 703 aa20.69■□□□□ 0.9
CHTOP-203ENST00000368690 USP44Q9H0E7 712 aa20.69■□□□□ 0.9
CHTOP-203ENST00000368690 MED1Q15648 1581 aaPredicted RBP20.69■□□□□ 0.9
CHTOP-203ENST00000368690 KDRP35968 1356 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 UBTFL1P0CB47 393 aaPredicted RBP20.68■□□□□ 0.9
CHTOP-203ENST00000368690 KRT85P78386 507 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 RUFY2Q8WXA3 655 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 KIF1BPQ96EK5 621 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 ZSWIM6Q9HCJ5 1215 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 IGSF1Q8N6C5 1336 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 CASTP20810 708 aaKnown RBP20.68■□□□□ 0.9
CHTOP-203ENST00000368690 PLA2G4DQ86XP0 818 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 RHPN1Q8TCX5 695 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
CHTOP-203ENST00000368690 PDRG1Q9NUG6 133 aa20.67■□□□□ 0.9
CHTOP-203ENST00000368690 DDX41Q9UJV9 622 aaKnown RBP20.67■□□□□ 0.9
CHTOP-203ENST00000368690 TTC41PQ6P2S7 1318 aa20.67■□□□□ 0.9
CHTOP-203ENST00000368690 LTBP4Q8N2S1 1624 aa20.67■□□□□ 0.9
CHTOP-203ENST00000368690 LARGE1O95461 756 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 CAVIN2O95810 425 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 MTHFSDQ2M296 383 aaKnown RBP20.66■□□□□ 0.9
CHTOP-203ENST00000368690 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 CCDC83Q8IWF9 413 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 TDRD7Q8NHU6 1098 aaKnown RBP20.66■□□□□ 0.9
CHTOP-203ENST00000368690 IL1RAPL2Q9NP60 686 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 DDX19AQ9NUU7 478 aaKnown RBP20.66■□□□□ 0.9
CHTOP-203ENST00000368690 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 SOS2Q07890 1332 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-203ENST00000368690 CDC25BP30305 580 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 CCDC186Q7Z3E2 898 aa20.66■□□□□ 0.9
CHTOP-203ENST00000368690 MORC2Q9Y6X9 1032 aaPredicted RBP20.66■□□□□ 0.9
CHTOP-203ENST00000368690 PDCP20941 246 aa20.65■□□□□ 0.9
CHTOP-203ENST00000368690 ZNF75DP51815 510 aa20.65■□□□□ 0.9
CHTOP-203ENST00000368690 HSP90AB4PQ58FF6 505 aa20.65■□□□□ 0.9
CHTOP-203ENST00000368690 ZSCAN25Q6NSZ9 544 aa20.65■□□□□ 0.9
CHTOP-203ENST00000368690 CYP46A1Q9Y6A2 500 aa20.65■□□□□ 0.9
CHTOP-203ENST00000368690 TTC6Q86TZ1 520 aa20.65■□□□□ 0.9
CHTOP-203ENST00000368690 LRRC59Q96AG4 307 aaKnown RBP20.65■□□□□ 0.9
CHTOP-203ENST00000368690 SCAND2PQ9GZW5 306 aaPredicted RBP20.65■□□□□ 0.9
CHTOP-203ENST00000368690 TNNT1P13805 278 aa20.64■□□□□ 0.89
CHTOP-203ENST00000368690 CBX8Q9HC52 389 aa20.64■□□□□ 0.89
CHTOP-203ENST00000368690 AXIN2Q9Y2T1 843 aa20.64■□□□□ 0.89
CHTOP-203ENST00000368690 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
CHTOP-203ENST00000368690 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
CHTOP-203ENST00000368690 CCDC112Q8NEF3 446 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 ANKRD24Q8TF21 1146 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
CHTOP-203ENST00000368690 CHRNA2Q15822 529 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 LUZP1Q86V48 1076 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 TNMDQ9H2S6 317 aa20.63■□□□□ 0.89
CHTOP-203ENST00000368690 NEMFO60524 1076 aa20.62■□□□□ 0.89
CHTOP-203ENST00000368690 ST3GAL1Q11201 340 aa20.62■□□□□ 0.89
CHTOP-203ENST00000368690 PPP1R42Q7Z4L9 355 aa20.62■□□□□ 0.89
CHTOP-203ENST00000368690 VPS37CA5D8V6 355 aaPredicted RBP20.62■□□□□ 0.89
CHTOP-203ENST00000368690 FAM193AP78312 1265 aa20.62■□□□□ 0.89
CHTOP-203ENST00000368690 JAKMIP1Q96N16 626 aaKnown RBP20.62■□□□□ 0.89
CHTOP-203ENST00000368690 CLSTN2Q9H4D0 955 aa20.62■□□□□ 0.89
CHTOP-203ENST00000368690 LIG1P18858 919 aa20.61■□□□□ 0.89
CHTOP-203ENST00000368690 TPRNQ4KMQ1 711 aa20.61■□□□□ 0.89
CHTOP-203ENST00000368690 CWC27Q6UX04 472 aaKnown RBP20.61■□□□□ 0.89
CHTOP-203ENST00000368690 C16orf45Q96MC5 204 aaPredicted RBP20.61■□□□□ 0.89
CHTOP-203ENST00000368690 ME3Q16798 604 aa20.61■□□□□ 0.89
CHTOP-203ENST00000368690 ANO6Q4KMQ2 910 aa20.61■□□□□ 0.89
CHTOP-203ENST00000368690 LARP1BQ659C4 914 aaKnown RBP20.61■□□□□ 0.89
CHTOP-203ENST00000368690 LARP6Q9BRS8 491 aaKnown RBP20.61■□□□□ 0.89
CHTOP-203ENST00000368690 TRIM5Q9C035 493 aa20.61■□□□□ 0.89
CHTOP-203ENST00000368690 ROBO1Q9Y6N7 1651 aa20.6■□□□□ 0.89
CHTOP-203ENST00000368690 MAP4K4O95819 1239 aaPredicted RBP20.6■□□□□ 0.89
CHTOP-203ENST00000368690 ALDH8A1Q9H2A2 487 aaPredicted RBP20.6■□□□□ 0.89
CHTOP-203ENST00000368690 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
CHTOP-203ENST00000368690 LRMPQ12912 555 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 NECTIN1Q15223 517 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 DRC7Q8IY82 874 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 KIF18AQ8NI77 898 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 SPG7Q9UQ90 795 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
CHTOP-203ENST00000368690 SARM1Q6SZW1 724 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 ZNF771Q7L3S4 317 aaPredicted RBP20.59■□□□□ 0.89
CHTOP-203ENST00000368690 DACT1Q9NYF0 836 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 RGPD5Q99666 1765 aa20.59■□□□□ 0.89
CHTOP-203ENST00000368690 RGPD2P0DJD1 1756 aa20.58■□□□□ 0.89
CHTOP-203ENST00000368690 CSB-PGBD3P0DP91 1061 aa20.58■□□□□ 0.89
CHTOP-203ENST00000368690 CPA1P15085 419 aa20.58■□□□□ 0.89
CHTOP-203ENST00000368690 RBM6P78332 1123 aaKnown RBP20.58■□□□□ 0.89
CHTOP-203ENST00000368690 PIP4K2BP78356 416 aa20.58■□□□□ 0.89
CHTOP-203ENST00000368690 ADCK5Q3MIX3 580 aa20.58■□□□□ 0.89
CHTOP-203ENST00000368690 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.88
CHTOP-203ENST00000368690 SLFN14P0C7P3 912 aa20.58■□□□□ 0.88
CHTOP-203ENST00000368690 ANKRD1Q15327 319 aa20.58■□□□□ 0.88
CHTOP-203ENST00000368690 PRDM11Q9NQV5 511 aa20.58■□□□□ 0.88
CHTOP-203ENST00000368690 PSMA5P28066 241 aa20.57■□□□□ 0.88
CHTOP-203ENST00000368690 PTH1RQ03431 593 aa20.57■□□□□ 0.88
CHTOP-203ENST00000368690 SLFNL1Q499Z3 407 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms