RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 KIF18AQ8NI77 898 aa16.65■□□□□ 0.26
CCT3-206ENST00000368262 CACTINQ8WUQ7 758 aaKnown RBP16.65■□□□□ 0.26
CCT3-206ENST00000368262 LEO1Q8WVC0 666 aaPredicted RBP16.65■□□□□ 0.26
CCT3-206ENST00000368262 TRIM5Q9C035 493 aa16.65■□□□□ 0.26
CCT3-206ENST00000368262 KCND1Q9NSA2 647 aa16.65■□□□□ 0.26
CCT3-206ENST00000368262 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
CCT3-206ENST00000368262 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.25
CCT3-206ENST00000368262 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
CCT3-206ENST00000368262 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
CCT3-206ENST00000368262 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
CCT3-206ENST00000368262 MAP4K1Q92918 833 aa16.64■□□□□ 0.25
CCT3-206ENST00000368262 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
CCT3-206ENST00000368262 NPHP4O75161 1426 aaPredicted RBP16.64■□□□□ 0.25
CCT3-206ENST00000368262 PSMA5P28066 241 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 CAMK4Q16566 473 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 BEND3Q5T5X7 828 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
CCT3-206ENST00000368262 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 MRFAP1L1Q96HT8 127 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 SPATA32Q96LK8 384 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
CCT3-206ENST00000368262 FAM193AP78312 1265 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 NYAP1Q6ZVC0 841 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 DRC7Q8IY82 874 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 CKAP2LQ8IYA6 745 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
CCT3-206ENST00000368262 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 HIP1O00291 1037 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 HOXB7P09629 217 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 ZNF165P49910 485 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 CCDC144BQ3MJ40 725 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 CEP135Q66GS9 1140 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
CCT3-206ENST00000368262 CLIP2Q9UDT6 1046 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 DIP2BQ9P265 1576 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 ADAMTS13Q76LX8 1427 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 NBPF7P0C2Y1 421 aaPredicted RBP16.62■□□□□ 0.25
CCT3-206ENST00000368262 IQCB1Q15051 598 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 TPD52L1Q16890 204 aaPredicted RBP16.62■□□□□ 0.25
CCT3-206ENST00000368262 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
CCT3-206ENST00000368262 SLC27A2O14975 620 aa16.61■□□□□ 0.25
CCT3-206ENST00000368262 TSGA10IPQ3SY00 556 aa16.61■□□□□ 0.25
CCT3-206ENST00000368262 ZNF771Q7L3S4 317 aaPredicted RBP16.61■□□□□ 0.25
CCT3-206ENST00000368262 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
CCT3-206ENST00000368262 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
CCT3-206ENST00000368262 ADCY9O60503 1353 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 LRRC8AQ8IWT6 810 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
CCT3-206ENST00000368262 RESTQ13127 1097 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 CREBRFQ8IUR6 639 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 KRT222Q8N1A0 295 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 DNAAF4Q8WXU2 420 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 DNAJC25Q9H1X3 360 aa16.6■□□□□ 0.25
CCT3-206ENST00000368262 NR1I2O75469 434 aa16.59■□□□□ 0.25
CCT3-206ENST00000368262 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
CCT3-206ENST00000368262 NAA30Q147X3 362 aaPredicted RBP16.59■□□□□ 0.25
CCT3-206ENST00000368262 LARP1Q6PKG0 1096 aaKnown RBP16.59■□□□□ 0.25
CCT3-206ENST00000368262 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
CCT3-206ENST00000368262 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
CCT3-206ENST00000368262 LMO7Q8WWI1 1683 aa16.59■□□□□ 0.25
CCT3-206ENST00000368262 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
CCT3-206ENST00000368262 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.25
CCT3-206ENST00000368262 TERF2Q15554 542 aa16.58■□□□□ 0.25
CCT3-206ENST00000368262 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.25
CCT3-206ENST00000368262 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.25
CCT3-206ENST00000368262 ERBB3P21860 1342 aa16.58■□□□□ 0.25
CCT3-206ENST00000368262 DTNBO60941 627 aa16.58■□□□□ 0.24
CCT3-206ENST00000368262 HMG20BQ9P0W2 317 aa16.58■□□□□ 0.24
CCT3-206ENST00000368262 MRC1P22897 1456 aa16.58■□□□□ 0.24
CCT3-206ENST00000368262 SLIT1O75093 1534 aa16.58■□□□□ 0.24
CCT3-206ENST00000368262 CTAGE5O15320 804 aa16.57■□□□□ 0.24
CCT3-206ENST00000368262 NMIQ13287 307 aaPredicted RBP16.57■□□□□ 0.24
CCT3-206ENST00000368262 KMT5BQ4FZB7 885 aa16.57■□□□□ 0.24
CCT3-206ENST00000368262 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
CCT3-206ENST00000368262 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
CCT3-206ENST00000368262 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
CCT3-206ENST00000368262 IGSF3O75054 1194 aa16.57■□□□□ 0.24
CCT3-206ENST00000368262 AMPHP49418 695 aa16.57■□□□□ 0.24
CCT3-206ENST00000368262 CCZ1BP86790 482 aa16.57■□□□□ 0.24
CCT3-206ENST00000368262 CCZ1P86791 482 aaPredicted RBP16.57■□□□□ 0.24
CCT3-206ENST00000368262 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
CCT3-206ENST00000368262 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
CCT3-206ENST00000368262 PTPN14Q15678 1187 aa16.56■□□□□ 0.24
CCT3-206ENST00000368262 STX1AQ16623 288 aa16.56■□□□□ 0.24
CCT3-206ENST00000368262 ZNF215Q9UL58 517 aaPredicted RBP16.56■□□□□ 0.24
CCT3-206ENST00000368262 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
CCT3-206ENST00000368262 COL9A3Q14050 684 aaPredicted RBP16.55■□□□□ 0.24
CCT3-206ENST00000368262 BICD2Q8TD16 824 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms