RNA–Protein interactions for RNA: ENST00000367979.6

NR1I3-201, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-201ENST00000367979 LTBP3Q9NS15 1303 aa16.71■□□□□ 0.27
NR1I3-201ENST00000367979 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
NR1I3-201ENST00000367979 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
NR1I3-201ENST00000367979 GLTPD2A6NH11 291 aa16.71■□□□□ 0.27
NR1I3-201ENST00000367979 CCDC93Q567U6 631 aa16.71■□□□□ 0.27
NR1I3-201ENST00000367979 COL4A1P02462 1669 aa16.7■□□□□ 0.26
NR1I3-201ENST00000367979 POTECB2RU33 542 aa16.7■□□□□ 0.26
NR1I3-201ENST00000367979 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
NR1I3-201ENST00000367979 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
NR1I3-201ENST00000367979 NLRP10Q86W26 655 aa16.69■□□□□ 0.26
NR1I3-201ENST00000367979 IFT57Q9NWB7 429 aa16.69■□□□□ 0.26
NR1I3-201ENST00000367979 TAF1P21675 1872 aa16.69■□□□□ 0.26
NR1I3-201ENST00000367979 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
NR1I3-201ENST00000367979 HOXB7P09629 217 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 HTRA3P83110 453 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
NR1I3-201ENST00000367979 PARP10Q53GL7 1025 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 PPP1R42Q7Z4L9 355 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
NR1I3-201ENST00000367979 C8orf58Q8NAV2 365 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
NR1I3-201ENST00000367979 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
NR1I3-201ENST00000367979 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
NR1I3-201ENST00000367979 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
NR1I3-201ENST00000367979 DDNO94850 711 aaPredicted RBP16.67■□□□□ 0.26
NR1I3-201ENST00000367979 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
NR1I3-201ENST00000367979 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
NR1I3-201ENST00000367979 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
NR1I3-201ENST00000367979 TSPYL6Q8N831 410 aa16.67■□□□□ 0.26
NR1I3-201ENST00000367979 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
NR1I3-201ENST00000367979 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
NR1I3-201ENST00000367979 ATP5J2-PTCD1G3V325 749 aa16.66■□□□□ 0.26
NR1I3-201ENST00000367979 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
NR1I3-201ENST00000367979 GNAI1P63096 354 aa16.66■□□□□ 0.26
NR1I3-201ENST00000367979 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
NR1I3-201ENST00000367979 PPEF1O14829 653 aaPredicted RBP16.65■□□□□ 0.26
NR1I3-201ENST00000367979 HOXA10P31260 410 aaPredicted RBP16.65■□□□□ 0.26
NR1I3-201ENST00000367979 PLBD2Q8NHP8 589 aa16.65■□□□□ 0.26
NR1I3-201ENST00000367979 ABCC4O15439 1325 aa16.65■□□□□ 0.26
NR1I3-201ENST00000367979 ANP32CO43423 234 aa16.64■□□□□ 0.25
NR1I3-201ENST00000367979 POTEIP0CG38 1075 aa16.64■□□□□ 0.25
NR1I3-201ENST00000367979 POTEJP0CG39 1038 aa16.64■□□□□ 0.25
NR1I3-201ENST00000367979 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
NR1I3-201ENST00000367979 RBM17Q96I25 401 aaKnown RBP16.64■□□□□ 0.25
NR1I3-201ENST00000367979 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
NR1I3-201ENST00000367979 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
NR1I3-201ENST00000367979 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
NR1I3-201ENST00000367979 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
NR1I3-201ENST00000367979 SLC10A5Q5PT55 438 aa16.63■□□□□ 0.25
NR1I3-201ENST00000367979 ANKRD13DQ6ZTN6 518 aa16.63■□□□□ 0.25
NR1I3-201ENST00000367979 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
NR1I3-201ENST00000367979 RTKN2Q8IZC4 609 aa16.63■□□□□ 0.25
NR1I3-201ENST00000367979 NLRP3Q96P20 1036 aa16.63■□□□□ 0.25
NR1I3-201ENST00000367979 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
NR1I3-201ENST00000367979 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
NR1I3-201ENST00000367979 CRAMP1Q96RY5 1269 aa16.62■□□□□ 0.25
NR1I3-201ENST00000367979 HYPKQ9NX55 129 aa16.62■□□□□ 0.25
NR1I3-201ENST00000367979 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
NR1I3-201ENST00000367979 LTBP1Q14766 1721 aa16.62■□□□□ 0.25
NR1I3-201ENST00000367979 DUOX1Q9NRD9 1551 aa16.61■□□□□ 0.25
NR1I3-201ENST00000367979 APLP1P51693 650 aa16.61■□□□□ 0.25
NR1I3-201ENST00000367979 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
NR1I3-201ENST00000367979 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
NR1I3-201ENST00000367979 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
NR1I3-201ENST00000367979 LRRC37AA6NMS7 1700 aa16.61■□□□□ 0.25
NR1I3-201ENST00000367979 FSTL1Q12841 308 aa16.6■□□□□ 0.25
NR1I3-201ENST00000367979 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
NR1I3-201ENST00000367979 PSMD1Q99460 953 aa16.6■□□□□ 0.25
NR1I3-201ENST00000367979 RNF123Q5XPI4 1314 aa16.6■□□□□ 0.25
NR1I3-201ENST00000367979 CCDC27Q2M243 656 aa16.59■□□□□ 0.25
NR1I3-201ENST00000367979 RIC3Q7Z5B4 369 aa16.59■□□□□ 0.25
NR1I3-201ENST00000367979 JARID2Q92833 1246 aaPredicted RBP16.59■□□□□ 0.25
NR1I3-201ENST00000367979 MYD88Q99836 296 aa16.59■□□□□ 0.25
NR1I3-201ENST00000367979 SCN4AP35499 1836 aa16.59■□□□□ 0.25
NR1I3-201ENST00000367979 FZD9O00144 591 aa16.58■□□□□ 0.24
NR1I3-201ENST00000367979 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
NR1I3-201ENST00000367979 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
NR1I3-201ENST00000367979 ATP6V0A2Q9Y487 856 aa16.58■□□□□ 0.24
NR1I3-201ENST00000367979 ADAMTSL1Q8N6G6 1762 aa16.58■□□□□ 0.24
NR1I3-201ENST00000367979 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
NR1I3-201ENST00000367979 AOC3Q16853 763 aa16.57■□□□□ 0.24
NR1I3-201ENST00000367979 GRAPQ13588 217 aa16.56■□□□□ 0.24
NR1I3-201ENST00000367979 G2E3Q7L622 706 aa16.56■□□□□ 0.24
NR1I3-201ENST00000367979 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
NR1I3-201ENST00000367979 GRAPLQ8TC17 118 aaPredicted RBP16.56■□□□□ 0.24
NR1I3-201ENST00000367979 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
NR1I3-201ENST00000367979 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
NR1I3-201ENST00000367979 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
NR1I3-201ENST00000367979 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
NR1I3-201ENST00000367979 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
NR1I3-201ENST00000367979 CC2D2BQ6DHV5 1058 aa16.55■□□□□ 0.24
NR1I3-201ENST00000367979 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
NR1I3-201ENST00000367979 LARGE2Q8N3Y3 721 aa16.55■□□□□ 0.24
NR1I3-201ENST00000367979 TAF1DQ9H5J8 278 aaPredicted RBP16.55■□□□□ 0.24
NR1I3-201ENST00000367979 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
NR1I3-201ENST00000367979 PPIP5K2O43314 1243 aa16.54■□□□□ 0.24
NR1I3-201ENST00000367979 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
NR1I3-201ENST00000367979 GJA3Q9Y6H8 435 aa16.54■□□□□ 0.24
NR1I3-201ENST00000367979 TRIM28Q13263 835 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms