RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 SEC24BO95487 1268 aa18.01■□□□□ 0.47
FBXO28-201ENST00000366862 MATR3P43243 847 aaKnown RBP eCLIP18.01■□□□□ 0.47
FBXO28-201ENST00000366862 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
FBXO28-201ENST00000366862 GTF3C6Q969F1 213 aa18.01■□□□□ 0.47
FBXO28-201ENST00000366862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
FBXO28-201ENST00000366862 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
FBXO28-201ENST00000366862 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.47
FBXO28-201ENST00000366862 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
FBXO28-201ENST00000366862 CCDC8Q9H0W5 538 aaPredicted RBP18■□□□□ 0.47
FBXO28-201ENST00000366862 RMND1Q9NWS8 449 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 ARFGAP2Q8N6H7 521 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 CCDC155Q8N6L0 562 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 RAB34Q9BZG1 259 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 ANKRD44Q8N8A2 993 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 MPHOSPH8Q99549 860 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 POLR3DP05423 398 aaPredicted RBP18■□□□□ 0.47
FBXO28-201ENST00000366862 CABP4P57796 275 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 ISM2Q6H9L7 571 aa18■□□□□ 0.47
FBXO28-201ENST00000366862 TMCO5BA8MYB1 307 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 IARSP41252 1262 aaKnown RBP17.99■□□□□ 0.47
FBXO28-201ENST00000366862 AMPD3Q01432 767 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 SPATA24Q86W54 205 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
FBXO28-201ENST00000366862 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
FBXO28-201ENST00000366862 DESP17661 470 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 UBE4AQ14139 1066 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 CEP57Q86XR8 500 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 FAM76AQ8TAV0 307 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 ABCC5O15440 1437 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 STAMBPO95630 424 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 FLIIQ13045 1269 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
FBXO28-201ENST00000366862 RSRC1Q96IZ7 334 aaKnown RBP17.99■□□□□ 0.47
FBXO28-201ENST00000366862 ATP2C2O75185 946 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 NAPBQ9H115 298 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 ZNF500O60304 480 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-201ENST00000366862 KRT83P78385 493 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 TUBB2AQ13885 445 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 TUBB2BQ9BVA1 445 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 TACC1O75410 805 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 SSR1P43307 286 aaKnown RBP17.98■□□□□ 0.47
FBXO28-201ENST00000366862 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
FBXO28-201ENST00000366862 TMEM132AQ24JP5 1023 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 ZGPATQ8N5A5 531 aaKnown RBP17.97■□□□□ 0.47
FBXO28-201ENST00000366862 DDX12PQ92771 950 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 STMN4Q9H169 189 aaPredicted RBP17.97■□□□□ 0.47
FBXO28-201ENST00000366862 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
FBXO28-201ENST00000366862 EVCP57679 992 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 CCDC129Q6ZRS4 1044 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 PPM1EQ8WY54 764 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 RTL1A6NKG5 1358 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 A0A1B0GUA9 196 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 AKR1B10O60218 316 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 RNF216Q9NWF9 866 aaPredicted RBP17.97■□□□□ 0.47
FBXO28-201ENST00000366862 HYPKQ9NX55 129 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 A6NNZ2 444 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
FBXO28-201ENST00000366862 B4GALNT4Q76KP1 1039 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 PLCD3Q8N3E9 789 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 FBF1Q8TES7 1133 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 CCDC114Q96M63 670 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 TMEM266Q2M3C6 531 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 CEP63Q96MT8 703 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 KRT86O43790 486 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 BMP15O95972 392 aa17.96■□□□□ 0.47
FBXO28-201ENST00000366862 TRIM21P19474 475 aaKnown RBP17.95■□□□□ 0.46
FBXO28-201ENST00000366862 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 CCDC6Q16204 474 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 USP26Q9BXU7 913 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 A0A087WZG4 1122 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 IFIT3O14879 490 aaKnown RBP17.95■□□□□ 0.46
FBXO28-201ENST00000366862 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 HOOK3Q86VS8 718 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 ANKRD24Q8TF21 1146 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 ASXL1Q8IXJ9 1541 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 PPP1R9BQ96SB3 815 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 PPP2R3AQ06190 1150 aa17.95■□□□□ 0.46
FBXO28-201ENST00000366862 NOP2P46087 812 aaKnown RBP17.94■□□□□ 0.46
FBXO28-201ENST00000366862 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 RHPN1Q8TCX5 695 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 AFAP1L1Q8TED9 768 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 SELENOOQ9BVL4 669 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 SEC63Q9UGP8 760 aaKnown RBP17.94■□□□□ 0.46
FBXO28-201ENST00000366862 CCDC194A0A1B0GVG4 234 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 METAP2P50579 478 aaKnown RBP eCLIP17.94■□□□□ 0.46
FBXO28-201ENST00000366862 NCOA7Q8NI08 942 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 BRF1Q92994 677 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 IFNKQ9P0W0 207 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
FBXO28-201ENST00000366862 KIAA0753Q2KHM9 967 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms