RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 FLIIQ13045 1269 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 ECHDC1Q9NTX5 307 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 ANO10Q9NW15 660 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
CLIP1-203ENST00000361654 GOLIM4O00461 696 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 PLS1Q14651 629 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 ZFYP08048 801 aaPredicted RBP12.62□□□□□ -0.39
CLIP1-203ENST00000361654 TDRD12Q587J7 1177 aaKnown RBP12.62□□□□□ -0.39
CLIP1-203ENST00000361654 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
CLIP1-203ENST00000361654 PIK3R4Q99570 1358 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
CLIP1-203ENST00000361654 IL2RBP14784 551 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 MTIF2P46199 727 aaKnown RBP12.62□□□□□ -0.39
CLIP1-203ENST00000361654 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 KRT23Q9C075 422 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 SYNCQ9H7C4 482 aa12.62□□□□□ -0.39
CLIP1-203ENST00000361654 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 GBP3Q9H0R5 595 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 PHACTR2O75167 634 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 ZNF354CQ86Y25 554 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 ACEP12821 1306 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 PLB1Q6P1J6 1458 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 CYP7A1P22680 504 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 DYDC1Q8WWB3 177 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 IMPG2Q9BZV3 1241 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 C6orf50Q9HD87 102 aa12.61□□□□□ -0.39
CLIP1-203ENST00000361654 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 ZSCAN12O43309 604 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 YEATS4O95619 227 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 NAA16Q6N069 864 aaPredicted RBP12.6□□□□□ -0.39
CLIP1-203ENST00000361654 CNNM3Q8NE01 707 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 ESR2Q92731 530 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 NOD1Q9Y239 953 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 NSD2O96028 1365 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 CTAGE5O15320 804 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 BMP15O95972 392 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 PAFAH1B1P43034 410 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 NOP2P46087 812 aaKnown RBP12.6□□□□□ -0.39
CLIP1-203ENST00000361654 MRPS9P82933 396 aaKnown RBP12.6□□□□□ -0.39
CLIP1-203ENST00000361654 TCHPQ9BT92 498 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 CNNM2Q9H8M5 875 aa12.6□□□□□ -0.39
CLIP1-203ENST00000361654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLIP1-203ENST00000361654 INCENPQ9NQS7 918 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 GCOM1H8Y6P7 765 aaPredicted RBP12.59□□□□□ -0.39
CLIP1-203ENST00000361654 MYZAPP0CAP1 466 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 TAF3Q5VWG9 929 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 KRT13P13646 458 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 FERP16591 822 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
CLIP1-203ENST00000361654 PICALMQ13492 652 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
CLIP1-203ENST00000361654 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
CLIP1-203ENST00000361654 LMAN1P49257 510 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLIP1-203ENST00000361654 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 PSMD1Q99460 953 aa12.59□□□□□ -0.39
CLIP1-203ENST00000361654 F6X3S4 739 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLIP1-203ENST00000361654 PLVAPQ9BX97 442 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
CLIP1-203ENST00000361654 PLEKHH1Q9ULM0 1364 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
CLIP1-203ENST00000361654 WTAPQ15007 396 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 KIF5CO60282 957 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 DDX12PQ92771 950 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
CLIP1-203ENST00000361654 FAM193AP78312 1265 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
CLIP1-203ENST00000361654 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
CLIP1-203ENST00000361654 MCM3P25205 808 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 PDE6BP35913 854 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 BAG6P46379 1132 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 MAP2K1Q02750 393 aaPredicted RBP12.57□□□□□ -0.4
CLIP1-203ENST00000361654 PLCD4Q9BRC7 762 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 CCDC66A2RUB6 948 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
CLIP1-203ENST00000361654 WDR7Q9Y4E6 1490 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
CLIP1-203ENST00000361654 TTC16Q8NEE8 873 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms