RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 GSDMDP57764 484 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 LOC102724159A0A0B4J2E5 919 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 BIN1O00499 593 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 EVCP57679 992 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 PWP2Q15269 919 aaKnown RBP13.36□□□□□ -0.27
CNOT3-202ENST00000358389 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
CNOT3-202ENST00000358389 ME1P48163 572 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 FAM193AP78312 1265 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 DEF6Q9H4E7 631 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
CNOT3-202ENST00000358389 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 ANKRD65E5RJM6 399 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 MCM6Q14566 821 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 SF3A1Q15459 793 aaKnown RBP13.35□□□□□ -0.27
CNOT3-202ENST00000358389 CCAR1Q8IX12 1150 aaKnown RBP13.35□□□□□ -0.27
CNOT3-202ENST00000358389 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 DHX16O60231 1041 aaKnown RBP13.35□□□□□ -0.27
CNOT3-202ENST00000358389 BLOC1S2Q6QNY1 142 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 TTC14Q96N46 770 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 NME9Q86XW9 330 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 ARFGAP3Q9NP61 516 aa13.35□□□□□ -0.27
CNOT3-202ENST00000358389 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 RGS22Q8NE09 1264 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 RRP15Q9Y3B9 282 aaKnown RBP13.34□□□□□ -0.27
CNOT3-202ENST00000358389 CLTCL1P53675 1640 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 MRFAP1L1Q96HT8 127 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 PPP1R13BQ96KQ4 1090 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 TRPM2O94759 1503 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 PTH1RQ03431 593 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 AIMP1Q12904 312 aaKnown RBP13.34□□□□□ -0.27
CNOT3-202ENST00000358389 VPS53Q5VIR6 699 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 VPS18Q9P253 973 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 TPCN1Q9ULQ1 816 aa13.34□□□□□ -0.27
CNOT3-202ENST00000358389 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.27
CNOT3-202ENST00000358389 PDILTQ8N807 584 aa13.33□□□□□ -0.27
CNOT3-202ENST00000358389 SECISBP2LQ93073 1101 aaKnown RBP13.33□□□□□ -0.27
CNOT3-202ENST00000358389 CAVIN2O95810 425 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 CCZ1BP86790 482 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 CCZ1P86791 482 aaPredicted RBP13.33□□□□□ -0.28
CNOT3-202ENST00000358389 LSG1Q9H089 658 aaKnown RBP13.33□□□□□ -0.28
CNOT3-202ENST00000358389 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
CNOT3-202ENST00000358389 PSMA5P28066 241 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 SIL1Q9H173 461 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 RIMS2Q9UQ26 1411 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 ABCA8O94911 1581 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
CNOT3-202ENST00000358389 PHACTR2O75167 634 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 CFAP45Q9UL16 551 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 NLRP6P59044 892 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 GUCY1B3Q02153 619 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 ORC3Q9UBD5 711 aaPredicted RBP13.32□□□□□ -0.28
CNOT3-202ENST00000358389 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
CNOT3-202ENST00000358389 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 RHPN1Q8TCX5 695 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 ICE2Q659A1 982 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 BRF1Q92994 677 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 PGBD1Q96JS3 809 aa13.32□□□□□ -0.28
CNOT3-202ENST00000358389 GNG11P61952 73 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 E2F4Q16254 413 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
CNOT3-202ENST00000358389 A0A1B0GUL7 405 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 CDC25BP30305 580 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 IL13P35225 146 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 FLIIQ13045 1269 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 SART3Q15020 963 aaKnown RBP13.31□□□□□ -0.28
CNOT3-202ENST00000358389 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 JAK2O60674 1132 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 SERPINC1P01008 464 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 TPM1P09493 284 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
CNOT3-202ENST00000358389 XPO4Q9C0E2 1151 aaKnown RBP13.31□□□□□ -0.28
CNOT3-202ENST00000358389 LMOD1P29536 600 aaPredicted RBP13.3□□□□□ -0.28
CNOT3-202ENST00000358389 ETF1P62495 437 aaKnown RBP13.3□□□□□ -0.28
CNOT3-202ENST00000358389 E4F1Q66K89 784 aaPredicted RBP13.3□□□□□ -0.28
CNOT3-202ENST00000358389 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
CNOT3-202ENST00000358389 UTP14AQ9BVJ6 771 aaKnown RBP13.3□□□□□ -0.28
CNOT3-202ENST00000358389 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
CNOT3-202ENST00000358389 PTPN21Q16825 1174 aa13.3□□□□□ -0.28
CNOT3-202ENST00000358389 CLASRPQ8N2M8 674 aaKnown RBP13.3□□□□□ -0.28
CNOT3-202ENST00000358389 PSME1Q06323 249 aa13.3□□□□□ -0.28
CNOT3-202ENST00000358389 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
CNOT3-202ENST00000358389 JRKLQ9Y4A0 524 aa13.3□□□□□ -0.28
CNOT3-202ENST00000358389 ELP1O95163 1332 aa13.3□□□□□ -0.28
CNOT3-202ENST00000358389 GOLGA5Q8TBA6 731 aa13.29□□□□□ -0.28
CNOT3-202ENST00000358389 ADAM21Q9UKJ8 722 aa13.29□□□□□ -0.28
CNOT3-202ENST00000358389 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
CNOT3-202ENST00000358389 CTAGE5O15320 804 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms