RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 BICDL1Q6ZP65 573 aa30.21■■■□□ 2.43
CHKA-202ENST00000356135 STK32BQ9NY57 414 aa30.21■■■□□ 2.43
CHKA-202ENST00000356135 NIP7Q9Y221 180 aaKnown RBP eCLIP30.21■■■□□ 2.43
CHKA-202ENST00000356135 ZNF652Q9Y2D9 606 aa30.21■■■□□ 2.43
CHKA-202ENST00000356135 MSH5O43196 834 aa30.2■■■□□ 2.43
CHKA-202ENST00000356135 TBC1D9BQ66K14 1250 aa30.2■■■□□ 2.43
CHKA-202ENST00000356135 PNPLA7Q6ZV29 1317 aa30.2■■■□□ 2.42
CHKA-202ENST00000356135 FAM177BA6PVY3 158 aa30.2■■■□□ 2.42
CHKA-202ENST00000356135 LRRFIP2Q9Y608 721 aaKnown RBP30.2■■■□□ 2.42
CHKA-202ENST00000356135 GNAI2P04899 355 aa30.19■■■□□ 2.42
CHKA-202ENST00000356135 AAMPQ13685 434 aa30.19■■■□□ 2.42
CHKA-202ENST00000356135 UBE3BQ7Z3V4 1068 aa30.19■■■□□ 2.42
CHKA-202ENST00000356135 TUBGCP6Q96RT7 1819 aa30.19■■■□□ 2.42
CHKA-202ENST00000356135 UTYO14607 1347 aa30.18■■■□□ 2.42
CHKA-202ENST00000356135 SUSD4Q5VX71 490 aa30.18■■■□□ 2.42
CHKA-202ENST00000356135 SCN7AQ01118 1682 aa30.18■■■□□ 2.42
CHKA-202ENST00000356135 H7C1W4 665 aa30.18■■■□□ 2.42
CHKA-202ENST00000356135 ANKRD36CQ5JPF3 1778 aa30.17■■■□□ 2.42
CHKA-202ENST00000356135 GYS1P13807 737 aa30.17■■■□□ 2.42
CHKA-202ENST00000356135 SYNE4Q8N205 404 aa30.17■■■□□ 2.42
CHKA-202ENST00000356135 SUCLG2Q96I99 432 aa30.17■■■□□ 2.42
CHKA-202ENST00000356135 CASP7P55210 303 aa30.16■■■□□ 2.42
CHKA-202ENST00000356135 FAM89AQ96GI7 184 aa30.16■■■□□ 2.42
CHKA-202ENST00000356135 KAZALD1Q96I82 304 aa30.15■■■□□ 2.42
CHKA-202ENST00000356135 IBTKQ9P2D0 1353 aaPredicted RBP30.15■■■□□ 2.42
CHKA-202ENST00000356135 IGHDP01880 384 aa30.14■■■□□ 2.42
CHKA-202ENST00000356135 SIRT2Q8IXJ6 389 aa30.14■■■□□ 2.42
CHKA-202ENST00000356135 FLAD1Q8NFF5 587 aa30.14■■■□□ 2.42
CHKA-202ENST00000356135 RGL2O15211 777 aa30.13■■■□□ 2.41
CHKA-202ENST00000356135 TRMT112Q9UI30 125 aaKnown RBP30.13■■■□□ 2.41
CHKA-202ENST00000356135 CEP85Q6P2H3 762 aa30.13■■■□□ 2.41
CHKA-202ENST00000356135 ZBTB38Q8NAP3 1195 aaPredicted RBP30.13■■■□□ 2.41
CHKA-202ENST00000356135 EPHA10Q5JZY3 1008 aa30.12■■■□□ 2.41
CHKA-202ENST00000356135 PCCAP05165 728 aaPredicted RBP30.11■■■□□ 2.41
CHKA-202ENST00000356135 PARP10Q53GL7 1025 aa30.11■■■□□ 2.41
CHKA-202ENST00000356135 SETDB2Q96T68 719 aa30.11■■■□□ 2.41
CHKA-202ENST00000356135 PDGFDQ9GZP0 370 aaPredicted RBP30.11■■■□□ 2.41
CHKA-202ENST00000356135 NFIXQ14938 502 aa30.1■■■□□ 2.41
CHKA-202ENST00000356135 UTP14AQ9BVJ6 771 aaKnown RBP30.1■■■□□ 2.41
CHKA-202ENST00000356135 BICC1Q9H694 974 aaKnown RBP30.1■■■□□ 2.41
CHKA-202ENST00000356135 NUTM1Q86Y26 1132 aa30.09■■■□□ 2.41
CHKA-202ENST00000356135 ANKRD44Q8N8A2 993 aa30.09■■■□□ 2.41
CHKA-202ENST00000356135 NTSR2O95665 410 aa30.08■■■□□ 2.41
CHKA-202ENST00000356135 PPP1R42Q7Z4L9 355 aa30.08■■■□□ 2.41
CHKA-202ENST00000356135 PNMA6EA0A0J9YXQ4 647 aa30.08■■■□□ 2.41
CHKA-202ENST00000356135 RPAP2Q8IXW5 612 aaPredicted RBP30.07■■■□□ 2.4
CHKA-202ENST00000356135 ATP8B2P98198 1209 aa30.06■■■□□ 2.4
CHKA-202ENST00000356135 MSL1Q68DK7 614 aa30.06■■■□□ 2.4
CHKA-202ENST00000356135 TM4SF1P30408 202 aa30.05■■■□□ 2.4
CHKA-202ENST00000356135 FOXO4P98177 505 aa30.05■■■□□ 2.4
CHKA-202ENST00000356135 HDAC5Q9UQL6 1122 aa30.05■■■□□ 2.4
CHKA-202ENST00000356135 IRS4O14654 1257 aaPredicted RBP30.04■■■□□ 2.4
CHKA-202ENST00000356135 CCDC24Q8N4L8 307 aa30.04■■■□□ 2.4
CHKA-202ENST00000356135 SH3TC1Q8TE82 1336 aa30.04■■■□□ 2.4
CHKA-202ENST00000356135 RWDD1Q9H446 243 aaPredicted RBP30.04■■■□□ 2.4
CHKA-202ENST00000356135 HCLS1P14317 486 aaPredicted RBP30.03■■■□□ 2.4
CHKA-202ENST00000356135 HDAC1Q13547 482 aaPredicted RBP30.03■■■□□ 2.4
CHKA-202ENST00000356135 ERFEQ4G0M1 354 aa30.03■■■□□ 2.4
CHKA-202ENST00000356135 NBPF5PQ86XG9 351 aaPredicted RBP30.03■■■□□ 2.4
CHKA-202ENST00000356135 CDHR2Q9BYE9 1310 aa30.03■■■□□ 2.4
CHKA-202ENST00000356135 NLGN1Q8N2Q7 840 aa30.03■■■□□ 2.4
CHKA-202ENST00000356135 DDR1Q08345 913 aa30.02■■■□□ 2.4
CHKA-202ENST00000356135 KDM2BQ8NHM5 1336 aa30.01■■■□□ 2.39
CHKA-202ENST00000356135 SRGAP3O43295 1099 aa30.01■■■□□ 2.39
CHKA-202ENST00000356135 LMBR1LQ6UX01 489 aa30.01■■■□□ 2.39
CHKA-202ENST00000356135 CARMIL3Q8ND23 1372 aa30.01■■■□□ 2.39
CHKA-202ENST00000356135 CCDC85AQ96PX6 553 aaPredicted RBP30■■■□□ 2.39
CHKA-202ENST00000356135 QSER1Q2KHR3 1735 aa30■■■□□ 2.39
CHKA-202ENST00000356135 GTF2E1P29083 439 aaPredicted RBP30■■■□□ 2.39
CHKA-202ENST00000356135 SERPINB2P05120 415 aa29.99■■■□□ 2.39
CHKA-202ENST00000356135 RABL6Q3YEC7 729 aaPredicted RBP29.99■■■□□ 2.39
CHKA-202ENST00000356135 TPTE2Q6XPS3 522 aa29.99■■■□□ 2.39
CHKA-202ENST00000356135 PLA2G12BQ9BX93 195 aa29.99■■■□□ 2.39
CHKA-202ENST00000356135 NYXQ9GZU5 481 aa29.99■■■□□ 2.39
CHKA-202ENST00000356135 COL24A1Q17RW2 1714 aa29.99■■■□□ 2.39
CHKA-202ENST00000356135 POLRMTO00411 1230 aaKnown RBP29.98■■■□□ 2.39
CHKA-202ENST00000356135 MTX1Q13505 466 aa29.98■■■□□ 2.39
CHKA-202ENST00000356135 CHMP3Q9Y3E7 222 aa29.98■■■□□ 2.39
CHKA-202ENST00000356135 R3HDM1Q15032 1099 aaKnown RBP29.98■■■□□ 2.39
CHKA-202ENST00000356135 SSH3Q8TE77 659 aa29.98■■■□□ 2.39
CHKA-202ENST00000356135 PDE8AO60658 829 aa29.97■■■□□ 2.39
CHKA-202ENST00000356135 MMP10P09238 476 aa29.96■■■□□ 2.39
CHKA-202ENST00000356135 POLA2Q14181 598 aa29.96■■■□□ 2.39
CHKA-202ENST00000356135 ABCC12Q96J65 1359 aa29.96■■■□□ 2.39
CHKA-202ENST00000356135 NPHP1O15259 732 aa29.95■■■□□ 2.39
CHKA-202ENST00000356135 CENPQQ7L2Z9 268 aaPredicted RBP29.95■■■□□ 2.39
CHKA-202ENST00000356135 HMMRO75330 724 aa29.95■■■□□ 2.38
CHKA-202ENST00000356135 PRR5LQ6MZQ0 368 aa29.95■■■□□ 2.38
CHKA-202ENST00000356135 TTLL11Q8NHH1 800 aa29.95■■■□□ 2.38
CHKA-202ENST00000356135 CSF1RP07333 972 aa29.94■■■□□ 2.38
CHKA-202ENST00000356135 CTSWP56202 376 aa29.94■■■□□ 2.38
CHKA-202ENST00000356135 C3orf67Q6ZVT6 689 aa29.94■■■□□ 2.38
CHKA-202ENST00000356135 CNBD1Q8NA66 436 aa29.94■■■□□ 2.38
CHKA-202ENST00000356135 KLHDC4Q8TBB5 520 aa29.94■■■□□ 2.38
CHKA-202ENST00000356135 PA2G4Q9UQ80 394 aaKnown RBP29.93■■■□□ 2.38
CHKA-202ENST00000356135 PSDA5PKW4 1024 aaPredicted RBP29.92■■■□□ 2.38
CHKA-202ENST00000356135 SLC10A5Q5PT55 438 aa29.92■■■□□ 2.38
CHKA-202ENST00000356135 DCTPP1Q9H773 170 aa29.92■■■□□ 2.38
CHKA-202ENST00000356135 FAM161AQ3B820 660 aa29.92■■■□□ 2.38
CHKA-202ENST00000356135 DDX60Q8IY21 1712 aaKnown RBP29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms