RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 TLR7Q9NYK1 1049 aaKnown RBP26.21■■□□□ 1.79
LIMS2-202ENST00000355119 CASTP20810 708 aaKnown RBP26.21■■□□□ 1.79
LIMS2-202ENST00000355119 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.21■■□□□ 1.79
LIMS2-202ENST00000355119 RFX5P48382 616 aaPredicted RBP26.2■■□□□ 1.78
LIMS2-202ENST00000355119 NMIQ13287 307 aaPredicted RBP26.2■■□□□ 1.78
LIMS2-202ENST00000355119 VPS53Q5VIR6 699 aa26.2■■□□□ 1.78
LIMS2-202ENST00000355119 PRPF40BQ6NWY9 871 aaKnown RBP26.2■■□□□ 1.78
LIMS2-202ENST00000355119 RUFY3Q7L099 469 aa26.2■■□□□ 1.78
LIMS2-202ENST00000355119 KLHDC4Q8TBB5 520 aa26.2■■□□□ 1.78
LIMS2-202ENST00000355119 ZCRB1Q8TBF4 217 aaKnown RBP26.2■■□□□ 1.78
LIMS2-202ENST00000355119 PIP4K2AP48426 406 aaPredicted RBP26.19■■□□□ 1.78
LIMS2-202ENST00000355119 NECTIN1Q15223 517 aa26.19■■□□□ 1.78
LIMS2-202ENST00000355119 ZSWIM6Q9HCJ5 1215 aa26.19■■□□□ 1.78
LIMS2-202ENST00000355119 PRDM11Q9NQV5 511 aa26.19■■□□□ 1.78
LIMS2-202ENST00000355119 ERVV-2B6SEH9 535 aa26.19■■□□□ 1.78
LIMS2-202ENST00000355119 UBE3BQ7Z3V4 1068 aa26.19■■□□□ 1.78
LIMS2-202ENST00000355119 JAKMIP1Q96N16 626 aaKnown RBP26.19■■□□□ 1.78
LIMS2-202ENST00000355119 BOLA2Q9H3K6 86 aa26.19■■□□□ 1.78
LIMS2-202ENST00000355119 RRAGDQ9NQL2 400 aaPredicted RBP26.19■■□□□ 1.78
LIMS2-202ENST00000355119 ZKSCAN1P17029 563 aaPredicted RBP26.18■■□□□ 1.78
LIMS2-202ENST00000355119 NASPP49321 788 aaPredicted RBP26.18■■□□□ 1.78
LIMS2-202ENST00000355119 ZSCAN31Q96LW9 406 aaPredicted RBP26.18■■□□□ 1.78
LIMS2-202ENST00000355119 FSD1Q9BTV5 496 aa26.18■■□□□ 1.78
LIMS2-202ENST00000355119 CYP46A1Q9Y6A2 500 aa26.18■■□□□ 1.78
LIMS2-202ENST00000355119 A0A087WZG4 1122 aa26.17■■□□□ 1.78
LIMS2-202ENST00000355119 TOM1L2Q6ZVM7 507 aa26.17■■□□□ 1.78
LIMS2-202ENST00000355119 PDRG1Q9NUG6 133 aa26.17■■□□□ 1.78
LIMS2-202ENST00000355119 RBM8AQ9Y5S9 174 aaKnown RBP26.17■■□□□ 1.78
LIMS2-202ENST00000355119 RPAP1Q9BWH6 1393 aaPredicted RBP26.17■■□□□ 1.78
LIMS2-202ENST00000355119 HSPA2P54652 639 aa26.17■■□□□ 1.78
LIMS2-202ENST00000355119 PTPN12Q05209 780 aaKnown RBP26.17■■□□□ 1.78
LIMS2-202ENST00000355119 MAP4K1Q92918 833 aa26.17■■□□□ 1.78
LIMS2-202ENST00000355119 FAM227BQ96M60 508 aa26.17■■□□□ 1.78
LIMS2-202ENST00000355119 CHAMP1Q96JM3 812 aa26.16■■□□□ 1.78
LIMS2-202ENST00000355119 SOS2Q07890 1332 aaPredicted RBP26.16■■□□□ 1.78
LIMS2-202ENST00000355119 ATP5JP18859 108 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 CASP7P55210 303 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 CREB3L3Q68CJ9 461 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 ANP32BQ92688 251 aaKnown RBP26.15■■□□□ 1.78
LIMS2-202ENST00000355119 SH2B1Q9NRF2 756 aaPredicted RBP26.15■■□□□ 1.78
LIMS2-202ENST00000355119 UBR2Q8IWV8 1755 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 COL5A2P05997 1499 aaPredicted RBP26.15■■□□□ 1.78
LIMS2-202ENST00000355119 ATP5J2-PTCD1G3V325 749 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 PTCD1O75127 700 aaKnown RBP26.15■■□□□ 1.78
LIMS2-202ENST00000355119 KCNJ4P48050 445 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 CCDC173Q0VFZ6 552 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 TNNI3KQ59H18 835 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 JARID2Q92833 1246 aaPredicted RBP26.15■■□□□ 1.78
LIMS2-202ENST00000355119 FPGT-TNNI3KV9GXZ4 949 aa26.15■■□□□ 1.78
LIMS2-202ENST00000355119 NKX1-1Q15270 411 aaPredicted RBP26.14■■□□□ 1.78
LIMS2-202ENST00000355119 RBM27Q9P2N5 1060 aaKnown RBP26.14■■□□□ 1.78
LIMS2-202ENST00000355119 SMC3Q9UQE7 1217 aa26.14■■□□□ 1.78
LIMS2-202ENST00000355119 ADCK5Q3MIX3 580 aa26.14■■□□□ 1.77
LIMS2-202ENST00000355119 PAPPAQ13219 1627 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 MED23Q9ULK4 1368 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 NBPF26B4DH59 902 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 PSMA5P28066 241 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 TFCP2Q12800 502 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 NBPF14Q5TI25 921 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 RNF20Q5VTR2 975 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 NBPF10Q6P3W6 841 aaKnown RBP26.13■■□□□ 1.77
LIMS2-202ENST00000355119 NBPF15Q8N660 670 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 RFX7Q2KHR2 1363 aa26.13■■□□□ 1.77
LIMS2-202ENST00000355119 A0A0D9SFI3 127 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 CPA1P15085 419 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 TRIM44Q96DX7 344 aaPredicted RBP26.12■■□□□ 1.77
LIMS2-202ENST00000355119 PPP1R9BQ96SB3 815 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 H7C1W4 665 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 CARD10Q9BWT7 1032 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 TMEM63CQ9P1W3 806 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 KCPQ6ZWJ8 1503 aa26.12■■□□□ 1.77
LIMS2-202ENST00000355119 SLC27A2O14975 620 aa26.11■■□□□ 1.77
LIMS2-202ENST00000355119 ZSCAN22P10073 491 aaPredicted RBP26.11■■□□□ 1.77
LIMS2-202ENST00000355119 IL2RBP14784 551 aa26.11■■□□□ 1.77
LIMS2-202ENST00000355119 DBNLQ9UJU6 430 aaKnown RBP26.11■■□□□ 1.77
LIMS2-202ENST00000355119 JCADQ9P266 1359 aa26.11■■□□□ 1.77
LIMS2-202ENST00000355119 SYAP1Q96A49 352 aaPredicted RBP26.1■■□□□ 1.77
LIMS2-202ENST00000355119 NUP188Q5SRE5 1749 aa26.1■■□□□ 1.77
LIMS2-202ENST00000355119 LRSAM1Q6UWE0 723 aa26.1■■□□□ 1.77
LIMS2-202ENST00000355119 CWC25Q9NXE8 425 aaPredicted RBP26.1■■□□□ 1.77
LIMS2-202ENST00000355119 STX6O43752 255 aa26.09■■□□□ 1.77
LIMS2-202ENST00000355119 TMEM87AQ8NBN3 555 aa26.09■■□□□ 1.77
LIMS2-202ENST00000355119 LARP6Q9BRS8 491 aaKnown RBP26.09■■□□□ 1.77
LIMS2-202ENST00000355119 SLAIN2Q9P270 581 aa26.09■■□□□ 1.77
LIMS2-202ENST00000355119 NSFL1CQ9UNZ2 370 aaKnown RBP26.09■■□□□ 1.77
LIMS2-202ENST00000355119 LMBR1LQ6UX01 489 aa26.09■■□□□ 1.77
LIMS2-202ENST00000355119 HMG20BQ9P0W2 317 aa26.09■■□□□ 1.77
LIMS2-202ENST00000355119 ABCA3Q99758 1704 aa26.08■■□□□ 1.77
LIMS2-202ENST00000355119 LARGE1O95461 756 aa26.08■■□□□ 1.77
LIMS2-202ENST00000355119 SYT1P21579 422 aa26.08■■□□□ 1.77
LIMS2-202ENST00000355119 FOXO4P98177 505 aa26.08■■□□□ 1.77
LIMS2-202ENST00000355119 PRIM1P49642 420 aaKnown RBP26.07■■□□□ 1.76
LIMS2-202ENST00000355119 RBSNQ9H1K0 784 aa26.07■■□□□ 1.76
LIMS2-202ENST00000355119 ATP6V1DQ9Y5K8 247 aa26.07■■□□□ 1.76
LIMS2-202ENST00000355119 TTLL7Q6ZT98 887 aa26.07■■□□□ 1.76
LIMS2-202ENST00000355119 CCDC83Q8IWF9 413 aa26.07■■□□□ 1.76
LIMS2-202ENST00000355119 ALDH8A1Q9H2A2 487 aaPredicted RBP26.07■■□□□ 1.76
LIMS2-202ENST00000355119 TNS2Q63HR2 1409 aa26.07■■□□□ 1.76
LIMS2-202ENST00000355119 ANKRD1Q15327 319 aa26.06■■□□□ 1.76
LIMS2-202ENST00000355119 USP48Q86UV5 1035 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms