RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 NBPF7P0C2Y1 421 aaPredicted RBP22.82■■□□□ 1.24
RNF38-202ENST00000350199 ATP2B3Q16720 1220 aa22.82■■□□□ 1.24
RNF38-202ENST00000350199 DZIP3Q86Y13 1208 aaKnown RBP22.82■■□□□ 1.24
RNF38-202ENST00000350199 ZNF496Q96IT1 587 aaPredicted RBP22.82■■□□□ 1.24
RNF38-202ENST00000350199 FAM43AQ8N2R8 423 aa22.82■■□□□ 1.24
RNF38-202ENST00000350199 SMARCC1Q92922 1105 aaPredicted RBP22.82■■□□□ 1.24
RNF38-202ENST00000350199 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
RNF38-202ENST00000350199 IKQ13123 557 aaPredicted RBP22.82■■□□□ 1.24
RNF38-202ENST00000350199 CCDC152Q4G0S7 254 aa22.82■■□□□ 1.24
RNF38-202ENST00000350199 KIF24Q5T7B8 1368 aa22.82■■□□□ 1.24
RNF38-202ENST00000350199 KAT6BQ8WYB5 2073 aa22.81■■□□□ 1.24
RNF38-202ENST00000350199 RBM8AQ9Y5S9 174 aaKnown RBP22.81■■□□□ 1.24
RNF38-202ENST00000350199 CHMLP26374 656 aa22.81■■□□□ 1.24
RNF38-202ENST00000350199 PLBD2Q8NHP8 589 aa22.81■■□□□ 1.24
RNF38-202ENST00000350199 TFCP2Q12800 502 aa22.8■■□□□ 1.24
RNF38-202ENST00000350199 SF3B2Q13435 895 aaKnown RBP22.8■■□□□ 1.24
RNF38-202ENST00000350199 AK7Q96M32 723 aa22.8■■□□□ 1.24
RNF38-202ENST00000350199 ARHGEF25Q86VW2 580 aa22.8■■□□□ 1.24
RNF38-202ENST00000350199 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
RNF38-202ENST00000350199 GJB2P29033 226 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 ATP2B2Q01814 1243 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 SYCE3A1L190 88 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 HAND2P61296 217 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 NMIQ13287 307 aaPredicted RBP22.79■■□□□ 1.24
RNF38-202ENST00000350199 ZNF592Q92610 1267 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 NUP62CLQ9H1M0 184 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 QRICH2Q9H0J4 1663 aa22.79■■□□□ 1.24
RNF38-202ENST00000350199 BAG4O95429 457 aaKnown RBP22.78■■□□□ 1.24
RNF38-202ENST00000350199 UQCRFS1P1P0C7P4 283 aa22.78■■□□□ 1.24
RNF38-202ENST00000350199 NIP7Q9Y221 180 aaKnown RBP eCLIP22.78■■□□□ 1.24
RNF38-202ENST00000350199 GIGYF1O75420 1035 aaPredicted RBP22.78■■□□□ 1.24
RNF38-202ENST00000350199 USP26Q9BXU7 913 aa22.78■■□□□ 1.24
RNF38-202ENST00000350199 CCT2P78371 535 aaKnown RBP22.78■■□□□ 1.24
RNF38-202ENST00000350199 WASF1Q92558 559 aa22.78■■□□□ 1.24
RNF38-202ENST00000350199 LAMC1P11047 1609 aa22.78■■□□□ 1.24
RNF38-202ENST00000350199 DZIP1Q86YF9 867 aaKnown RBP22.78■■□□□ 1.24
RNF38-202ENST00000350199 KIDINS220Q9ULH0 1771 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 STX6O43752 255 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 PCMTD1Q96MG8 357 aaPredicted RBP22.77■■□□□ 1.24
RNF38-202ENST00000350199 TCEAL9Q9UHQ7 104 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 PHKG2P15735 406 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
RNF38-202ENST00000350199 MCMDC2Q4G0Z9 681 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 RPGRQ92834 1020 aaKnown RBP22.77■■□□□ 1.24
RNF38-202ENST00000350199 RTL1A6NKG5 1358 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 IL27Q8NEV9 243 aa22.77■■□□□ 1.24
RNF38-202ENST00000350199 ZNF853P0CG23 659 aa22.77■■□□□ 1.23
RNF38-202ENST00000350199 NBPF5PQ86XG9 351 aaPredicted RBP22.77■■□□□ 1.23
RNF38-202ENST00000350199 A1BGP04217 495 aa22.76■■□□□ 1.23
RNF38-202ENST00000350199 RFC4P35249 363 aa22.76■■□□□ 1.23
RNF38-202ENST00000350199 RBM5P52756 815 aaKnown RBP eCLIP22.76■■□□□ 1.23
RNF38-202ENST00000350199 SCAND2PQ9GZW5 306 aaPredicted RBP22.76■■□□□ 1.23
RNF38-202ENST00000350199 ZFYP08048 801 aaPredicted RBP22.76■■□□□ 1.23
RNF38-202ENST00000350199 GOLGA8BA8MQT2 603 aa22.76■■□□□ 1.23
RNF38-202ENST00000350199 USP5P45974 858 aa22.76■■□□□ 1.23
RNF38-202ENST00000350199 IRS4O14654 1257 aaPredicted RBP22.75■■□□□ 1.23
RNF38-202ENST00000350199 TCEANC2Q96MN5 208 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 UTP14AQ9BVJ6 771 aaKnown RBP22.75■■□□□ 1.23
RNF38-202ENST00000350199 PAG1Q9NWQ8 432 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 SUCLG2Q96I99 432 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 GDPD2Q9HCC8 539 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 TXLNAP40222 546 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 GUCY1B3Q02153 619 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 KLHDC4Q8TBB5 520 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 C8orf76Q96K31 380 aa22.75■■□□□ 1.23
RNF38-202ENST00000350199 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.74■■□□□ 1.23
RNF38-202ENST00000350199 USP44Q9H0E7 712 aa22.74■■□□□ 1.23
RNF38-202ENST00000350199 BRPF1P55201 1214 aaPredicted RBP22.74■■□□□ 1.23
RNF38-202ENST00000350199 RNF41Q9H4P4 317 aaPredicted RBP22.73■■□□□ 1.23
RNF38-202ENST00000350199 RBM25P49756 843 aaKnown RBP22.73■■□□□ 1.23
RNF38-202ENST00000350199 GCKRQ14397 625 aa22.73■■□□□ 1.23
RNF38-202ENST00000350199 IFIT3O14879 490 aaKnown RBP22.73■■□□□ 1.23
RNF38-202ENST00000350199 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
RNF38-202ENST00000350199 FAM89AQ96GI7 184 aa22.73■■□□□ 1.23
RNF38-202ENST00000350199 NOL7Q9UMY1 257 aaKnown RBP22.73■■□□□ 1.23
RNF38-202ENST00000350199 NECAB1Q8N987 351 aa22.73■■□□□ 1.23
RNF38-202ENST00000350199 SLC12A7Q9Y666 1083 aa22.73■■□□□ 1.23
RNF38-202ENST00000350199 PIBF1Q8WXW3 757 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 BRF1Q92994 677 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
RNF38-202ENST00000350199 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
RNF38-202ENST00000350199 SETDB2Q96T68 719 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 ANKARQ7Z5J8 1434 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 HOMER1Q86YM7 354 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 SMC2O95347 1197 aa22.72■■□□□ 1.23
RNF38-202ENST00000350199 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
RNF38-202ENST00000350199 CCDC191Q8NCU4 936 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 NCOA7Q8NI08 942 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 FAM13BQ9NYF5 915 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 CCDC196A0A1B0GTZ2 297 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 MAP3K11Q16584 847 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
RNF38-202ENST00000350199 POLR3DP05423 398 aaPredicted RBP22.7■■□□□ 1.23
RNF38-202ENST00000350199 CAMK4Q16566 473 aa22.7■■□□□ 1.23
RNF38-202ENST00000350199 CCDC82Q8N4S0 544 aa22.7■■□□□ 1.23
RNF38-202ENST00000350199 IQCA1Q86XH1 822 aa22.7■■□□□ 1.22
RNF38-202ENST00000350199 ZSCAN29Q8IWY8 852 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms