RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 FSIP1Q8NA03 581 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 BRF1Q92994 677 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 ALDH1L1O75891 902 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 PDE4BQ07343 736 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 TTLL12Q14166 644 aaPredicted RBP21.59■■□□□ 1.05
UBE3C-201ENST00000348165 TRMT1LQ7Z2T5 733 aaKnown RBP21.59■■□□□ 1.05
UBE3C-201ENST00000348165 ANKRD18AQ8IVF6 992 aa21.58■■□□□ 1.05
UBE3C-201ENST00000348165 C16orf71Q8IYS4 520 aaPredicted RBP21.58■■□□□ 1.05
UBE3C-201ENST00000348165 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
UBE3C-201ENST00000348165 LRRC2Q9BYS8 371 aa21.58■■□□□ 1.05
UBE3C-201ENST00000348165 FLT4P35916 1363 aa21.58■■□□□ 1.05
UBE3C-201ENST00000348165 PLEKHH1Q9ULM0 1364 aa21.58■■□□□ 1.05
UBE3C-201ENST00000348165 ATP8B2P98198 1209 aa21.58■■□□□ 1.04
UBE3C-201ENST00000348165 CNNM3Q8NE01 707 aa21.58■■□□□ 1.04
UBE3C-201ENST00000348165 FEZ1Q99689 392 aa21.58■■□□□ 1.04
UBE3C-201ENST00000348165 RAB34Q9BZG1 259 aa21.58■■□□□ 1.04
UBE3C-201ENST00000348165 PHAXQ9H814 394 aaKnown RBP21.58■■□□□ 1.04
UBE3C-201ENST00000348165 STX8Q9UNK0 236 aa21.58■■□□□ 1.04
UBE3C-201ENST00000348165 NIP7Q9Y221 180 aaKnown RBP eCLIP21.58■■□□□ 1.04
UBE3C-201ENST00000348165 IL2RBP14784 551 aa21.57■■□□□ 1.04
UBE3C-201ENST00000348165 SFPQP23246 707 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBE3C-201ENST00000348165 METAP2P50579 478 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBE3C-201ENST00000348165 KIAA1328Q86T90 577 aa21.57■■□□□ 1.04
UBE3C-201ENST00000348165 NUP160Q12769 1436 aa21.57■■□□□ 1.04
UBE3C-201ENST00000348165 CUL5Q93034 780 aa21.57■■□□□ 1.04
UBE3C-201ENST00000348165 TBC1D32Q96NH3 1257 aa21.57■■□□□ 1.04
UBE3C-201ENST00000348165 BIN1O00499 593 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 ERLIN2O94905 339 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 NECAB1Q8N987 351 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 NLRP3Q96P20 1036 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 PPP1R12BO60237 982 aaPredicted RBP21.56■■□□□ 1.04
UBE3C-201ENST00000348165 VAMP4O75379 141 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 CWF19L2Q2TBE0 894 aaKnown RBP21.56■■□□□ 1.04
UBE3C-201ENST00000348165 SPTY2D1Q68D10 685 aaPredicted RBP21.56■■□□□ 1.04
UBE3C-201ENST00000348165 SLC26A6Q9BXS9 759 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 KAT14Q9H8E8 782 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 TMEM266Q2M3C6 531 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 HMG20BQ9P0W2 317 aa21.56■■□□□ 1.04
UBE3C-201ENST00000348165 LINS1Q8NG48 757 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 KIF5BP33176 963 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 POLR3AO14802 1390 aaPredicted RBP21.55■■□□□ 1.04
UBE3C-201ENST00000348165 PARD3Q8TEW0 1356 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 NEFHP12036 1026 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 CYP7A1P22680 504 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 NPATQ14207 1427 aa21.55■■□□□ 1.04
UBE3C-201ENST00000348165 ST5P78524 1137 aa21.54■■□□□ 1.04
UBE3C-201ENST00000348165 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
UBE3C-201ENST00000348165 LEKR1Q6ZMV7 388 aa21.54■■□□□ 1.04
UBE3C-201ENST00000348165 MCM5P33992 734 aa21.54■■□□□ 1.04
UBE3C-201ENST00000348165 CRNKL1Q9BZJ0 848 aaKnown RBP21.54■■□□□ 1.04
UBE3C-201ENST00000348165 MAP3K19Q56UN5 1328 aa21.54■■□□□ 1.04
UBE3C-201ENST00000348165 KLF18A0A0U1RQI7 1052 aa21.53■■□□□ 1.04
UBE3C-201ENST00000348165 IL15P40933 162 aaPredicted RBP21.53■■□□□ 1.04
UBE3C-201ENST00000348165 SSR1P43307 286 aaKnown RBP21.53■■□□□ 1.04
UBE3C-201ENST00000348165 ZNF397Q8NF99 534 aaPredicted RBP21.53■■□□□ 1.04
UBE3C-201ENST00000348165 SCLT1Q96NL6 688 aa21.53■■□□□ 1.04
UBE3C-201ENST00000348165 RLBP1P12271 317 aa21.53■■□□□ 1.04
UBE3C-201ENST00000348165 IDEP14735 1019 aa21.53■■□□□ 1.04
UBE3C-201ENST00000348165 ZMYM3Q14202 1370 aa21.53■■□□□ 1.04
UBE3C-201ENST00000348165 F8W031 263 aaPredicted RBP21.53■■□□□ 1.04
UBE3C-201ENST00000348165 MAPK8IP2Q13387 824 aaPredicted RBP21.53■■□□□ 1.04
UBE3C-201ENST00000348165 ENOX2Q16206 610 aaKnown RBP21.53■■□□□ 1.04
UBE3C-201ENST00000348165 CABP5Q9NP86 173 aa21.53■■□□□ 1.04
UBE3C-201ENST00000348165 HLA-DOAP06340 250 aa21.52■■□□□ 1.04
UBE3C-201ENST00000348165 TMX3Q96JJ7 454 aa21.52■■□□□ 1.04
UBE3C-201ENST00000348165 RBM8AQ9Y5S9 174 aaKnown RBP21.52■■□□□ 1.04
UBE3C-201ENST00000348165 SLC9C2Q5TAH2 1124 aa21.52■■□□□ 1.04
UBE3C-201ENST00000348165 DZIP3Q86Y13 1208 aaKnown RBP21.52■■□□□ 1.04
UBE3C-201ENST00000348165 SMARCC1Q92922 1105 aaPredicted RBP21.52■■□□□ 1.04
UBE3C-201ENST00000348165 CENPHQ9H3R5 247 aa21.52■■□□□ 1.04
UBE3C-201ENST00000348165 A0A1W2PP64 1363 aa21.52■■□□□ 1.04
UBE3C-201ENST00000348165 HELBQ8NG08 1087 aaPredicted RBP21.52■■□□□ 1.04
UBE3C-201ENST00000348165 USP25Q9UHP3 1055 aa21.52■■□□□ 1.04
UBE3C-201ENST00000348165 PUS7Q96PZ0 661 aaKnown RBP21.52■■□□□ 1.03
UBE3C-201ENST00000348165 ABCC10Q5T3U5 1492 aa21.52■■□□□ 1.03
UBE3C-201ENST00000348165 ZFYP08048 801 aaPredicted RBP21.51■■□□□ 1.03
UBE3C-201ENST00000348165 FKBP15Q5T1M5 1219 aa21.51■■□□□ 1.03
UBE3C-201ENST00000348165 CPLX3Q8WVH0 158 aa21.51■■□□□ 1.03
UBE3C-201ENST00000348165 CACNA2D4Q7Z3S7 1137 aa21.51■■□□□ 1.03
UBE3C-201ENST00000348165 TSG101Q99816 390 aa21.51■■□□□ 1.03
UBE3C-201ENST00000348165 SLC4A4Q9Y6R1 1079 aa21.51■■□□□ 1.03
UBE3C-201ENST00000348165 BAG4O95429 457 aaKnown RBP21.51■■□□□ 1.03
UBE3C-201ENST00000348165 TOP1P11387 765 aaKnown RBP21.51■■□□□ 1.03
UBE3C-201ENST00000348165 ESYT1Q9BSJ8 1104 aa21.51■■□□□ 1.03
UBE3C-201ENST00000348165 DDX19AQ9NUU7 478 aaKnown RBP21.51■■□□□ 1.03
UBE3C-201ENST00000348165 CTAGE5O15320 804 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 WTAPQ15007 396 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 TAF4BQ92750 862 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 GOLGA6L10A6NI86 522 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 HOXC9P31274 260 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 ISM2Q6H9L7 571 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 TCP11L1Q9NUJ3 509 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 UBA7P41226 1012 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 ZSCAN30Q86W11 494 aa21.5■■□□□ 1.03
UBE3C-201ENST00000348165 CCDC12Q8WUD4 166 aaPredicted RBP21.5■■□□□ 1.03
UBE3C-201ENST00000348165 ERLIN1O75477 346 aa21.49■■□□□ 1.03
UBE3C-201ENST00000348165 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
UBE3C-201ENST00000348165 UTP14AQ9BVJ6 771 aaKnown RBP21.49■■□□□ 1.03
UBE3C-201ENST00000348165 DCAF5Q96JK2 942 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms