RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 BABAM1Q9NWV8 329 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 LETM1O95202 739 aaPredicted RBP17.37■□□□□ 0.37
SMTN-202ENST00000347557 KSR2Q6VAB6 950 aa17.37■□□□□ 0.37
SMTN-202ENST00000347557 DRC7Q8IY82 874 aa17.37■□□□□ 0.37
SMTN-202ENST00000347557 A0A0D9SFI3 127 aa17.37■□□□□ 0.37
SMTN-202ENST00000347557 RGPD8O14715 1765 aaPredicted RBP17.37■□□□□ 0.37
SMTN-202ENST00000347557 CEBPZQ03701 1054 aaKnown RBP17.36■□□□□ 0.37
SMTN-202ENST00000347557 UVSSAQ2YD98 709 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 BLOC1S2Q6QNY1 142 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
SMTN-202ENST00000347557 ZSWIM6Q9HCJ5 1215 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
SMTN-202ENST00000347557 SASH1O94885 1247 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 IPO4Q8TEX9 1081 aaKnown RBP17.36■□□□□ 0.37
SMTN-202ENST00000347557 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
SMTN-202ENST00000347557 ST3GAL1Q11201 340 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 ERC1Q8IUD2 1116 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 TMEM87AQ8NBN3 555 aa17.36■□□□□ 0.37
SMTN-202ENST00000347557 GRM8O00222 908 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 SLC27A2O14975 620 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 GIGYF1O75420 1035 aaPredicted RBP17.35■□□□□ 0.37
SMTN-202ENST00000347557 LIG1P18858 919 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 TERF1P54274 439 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 KRT85P78386 507 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 TTC6Q86TZ1 520 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 DDX11Q96FC9 970 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
SMTN-202ENST00000347557 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 UBR1Q8IWV7 1749 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 AP5Z1O43299 807 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 CHGBP05060 677 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
SMTN-202ENST00000347557 DNAJC2Q99543 621 aaKnown RBP17.34■□□□□ 0.37
SMTN-202ENST00000347557 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
SMTN-202ENST00000347557 ZHX1Q9UKY1 873 aaPredicted RBP17.34■□□□□ 0.37
SMTN-202ENST00000347557 XRN1Q8IZH2 1706 aaKnown RBP17.34■□□□□ 0.37
SMTN-202ENST00000347557 DYNC1I1O14576 645 aa17.34■□□□□ 0.37
SMTN-202ENST00000347557 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
SMTN-202ENST00000347557 LUZP1Q86V48 1076 aa17.34■□□□□ 0.37
SMTN-202ENST00000347557 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
SMTN-202ENST00000347557 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
SMTN-202ENST00000347557 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
SMTN-202ENST00000347557 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.37
SMTN-202ENST00000347557 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.37
SMTN-202ENST00000347557 BICD2Q8TD16 824 aa17.33■□□□□ 0.37
SMTN-202ENST00000347557 PIBF1Q8WXW3 757 aa17.33■□□□□ 0.37
SMTN-202ENST00000347557 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.37
SMTN-202ENST00000347557 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 FMN2Q9NZ56 1722 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.36
SMTN-202ENST00000347557 PSMA5P28066 241 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 MYD88Q99836 296 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 NUP62CLQ9H1M0 184 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 DACT1Q9NYF0 836 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 CEMIPQ8WUJ3 1361 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 PIK3C2AO00443 1686 aa17.33■□□□□ 0.36
SMTN-202ENST00000347557 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
SMTN-202ENST00000347557 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 CCDC129Q6ZRS4 1044 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 IL17RAQ96F46 866 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
SMTN-202ENST00000347557 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 ALDH1L1O75891 902 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 PYCARDQ9ULZ3 195 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 HOXB7P09629 217 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
SMTN-202ENST00000347557 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 MAP3K11Q16584 847 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 LINS1Q8NG48 757 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 JAK2O60674 1132 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
SMTN-202ENST00000347557 GCP02774 474 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
SMTN-202ENST00000347557 XAGE3Q8WTP9 111 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 SEC62Q99442 399 aaKnown RBP17.3■□□□□ 0.36
SMTN-202ENST00000347557 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 H3BQV1 296 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
SMTN-202ENST00000347557 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 TM6SF1Q9BZW5 370 aa17.3■□□□□ 0.36
SMTN-202ENST00000347557 PTGS1P23219 599 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 MTX1Q13505 466 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 NWD1Q149M9 1564 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 TYRO3Q06418 890 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 ANO6Q4KMQ2 910 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 TRIM5Q9C035 493 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
SMTN-202ENST00000347557 PDCP20941 246 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms