RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 GABPB1Q06547 395 aaPredicted RBP25.42■■□□□ 1.66
TRIM3-201ENST00000345851 TPD52L1Q16890 204 aaPredicted RBP25.42■■□□□ 1.66
TRIM3-201ENST00000345851 TAF3Q5VWG9 929 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 NUP62CLQ9H1M0 184 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 RGPD2P0DJD1 1756 aa25.41■■□□□ 1.66
TRIM3-201ENST00000345851 ANO6Q4KMQ2 910 aa25.41■■□□□ 1.66
TRIM3-201ENST00000345851 LRRFIP2Q9Y608 721 aaKnown RBP25.41■■□□□ 1.66
TRIM3-201ENST00000345851 ZSCAN25Q6NSZ9 544 aa25.4■■□□□ 1.66
TRIM3-201ENST00000345851 VGLL3A8MV65 326 aa25.4■■□□□ 1.66
TRIM3-201ENST00000345851 TTC6Q86TZ1 520 aa25.4■■□□□ 1.66
TRIM3-201ENST00000345851 CBX8Q9HC52 389 aa25.4■■□□□ 1.66
TRIM3-201ENST00000345851 CWC27Q6UX04 472 aaKnown RBP25.39■■□□□ 1.66
TRIM3-201ENST00000345851 ANKRD24Q8TF21 1146 aa25.39■■□□□ 1.66
TRIM3-201ENST00000345851 SGSM2O43147 1006 aa25.39■■□□□ 1.65
TRIM3-201ENST00000345851 ATP8B2P98198 1209 aa25.39■■□□□ 1.65
TRIM3-201ENST00000345851 KIF18AQ8NI77 898 aa25.39■■□□□ 1.65
TRIM3-201ENST00000345851 NECAB1Q8N987 351 aa25.38■■□□□ 1.65
TRIM3-201ENST00000345851 MPRIPQ6WCQ1 1025 aa25.37■■□□□ 1.65
TRIM3-201ENST00000345851 LSG1Q9H089 658 aaKnown RBP25.37■■□□□ 1.65
TRIM3-201ENST00000345851 SYCP1Q15431 976 aa25.37■■□□□ 1.65
TRIM3-201ENST00000345851 CHRNA2Q15822 529 aa25.37■■□□□ 1.65
TRIM3-201ENST00000345851 CACTINQ8WUQ7 758 aaKnown RBP25.37■■□□□ 1.65
TRIM3-201ENST00000345851 MAP3K5Q99683 1374 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 TNMDQ9H2S6 317 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 GNAI3P08754 354 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 KCNJ4P48050 445 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 ZNF75DP51815 510 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 HYPKQ9NX55 129 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 DACT1Q9NYF0 836 aa25.36■■□□□ 1.65
TRIM3-201ENST00000345851 MORC2Q9Y6X9 1032 aaPredicted RBP25.35■■□□□ 1.65
TRIM3-201ENST00000345851 MST1RQ04912 1400 aa25.35■■□□□ 1.65
TRIM3-201ENST00000345851 ERICH4A6NGS2 130 aa25.35■■□□□ 1.65
TRIM3-201ENST00000345851 PAXBP1Q9Y5B6 917 aa25.35■■□□□ 1.65
TRIM3-201ENST00000345851 JAKMIP1Q96N16 626 aaKnown RBP25.34■■□□□ 1.65
TRIM3-201ENST00000345851 TERF2Q15554 542 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 ADCK5Q3MIX3 580 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 CLIP2Q9UDT6 1046 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 KCNQ3O43525 872 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 CCDC144BQ3MJ40 725 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 CEP135Q66GS9 1140 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 ZNF530Q6P9A1 599 aaPredicted RBP25.34■■□□□ 1.65
TRIM3-201ENST00000345851 CCDC144CPQ8IYA2 1237 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 STK31Q9BXU1 1019 aa25.34■■□□□ 1.65
TRIM3-201ENST00000345851 KRT85P78386 507 aa25.33■■□□□ 1.65
TRIM3-201ENST00000345851 ZNF335Q9H4Z2 1342 aaPredicted RBP25.33■■□□□ 1.65
TRIM3-201ENST00000345851 PDRG1Q9NUG6 133 aa25.33■■□□□ 1.65
TRIM3-201ENST00000345851 KMT5BQ4FZB7 885 aa25.33■■□□□ 1.64
TRIM3-201ENST00000345851 KRT222Q8N1A0 295 aa25.33■■□□□ 1.64
TRIM3-201ENST00000345851 ZNF215Q9UL58 517 aaPredicted RBP25.33■■□□□ 1.64
TRIM3-201ENST00000345851 GOLGA6L4A6NEF3 574 aa25.32■■□□□ 1.64
TRIM3-201ENST00000345851 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
TRIM3-201ENST00000345851 TFIP11Q9UBB9 837 aaKnown RBP25.32■■□□□ 1.64
TRIM3-201ENST00000345851 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
TRIM3-201ENST00000345851 USP27XA6NNY8 438 aa25.32■■□□□ 1.64
TRIM3-201ENST00000345851 SURF6O75683 361 aaKnown RBP25.32■■□□□ 1.64
TRIM3-201ENST00000345851 CDK11BP21127 795 aaKnown RBP25.32■■□□□ 1.64
TRIM3-201ENST00000345851 FLIIQ13045 1269 aa25.32■■□□□ 1.64
TRIM3-201ENST00000345851 LARP1BQ659C4 914 aaKnown RBP25.32■■□□□ 1.64
TRIM3-201ENST00000345851 ST3GAL1Q11201 340 aa25.31■■□□□ 1.64
TRIM3-201ENST00000345851 MAPK8IP2Q13387 824 aaPredicted RBP25.31■■□□□ 1.64
TRIM3-201ENST00000345851 ARID5BQ14865 1188 aa25.31■■□□□ 1.64
TRIM3-201ENST00000345851 TAF7Q15545 349 aaPredicted RBP25.31■■□□□ 1.64
TRIM3-201ENST00000345851 PLA2G4DQ86XP0 818 aa25.31■■□□□ 1.64
TRIM3-201ENST00000345851 DNAJC25Q9H1X3 360 aa25.31■■□□□ 1.64
TRIM3-201ENST00000345851 ST7Q9NRC1 585 aa25.31■■□□□ 1.64
TRIM3-201ENST00000345851 NPHP1O15259 732 aa25.31■■□□□ 1.64
TRIM3-201ENST00000345851 PRPF40BQ6NWY9 871 aaKnown RBP25.3■■□□□ 1.64
TRIM3-201ENST00000345851 PI4K2BQ8TCG2 481 aa25.3■■□□□ 1.64
TRIM3-201ENST00000345851 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.3■■□□□ 1.64
TRIM3-201ENST00000345851 EIF2S2P20042 333 aaKnown RBP25.3■■□□□ 1.64
TRIM3-201ENST00000345851 ME3Q16798 604 aa25.3■■□□□ 1.64
TRIM3-201ENST00000345851 CADPS2Q86UW7 1296 aa25.3■■□□□ 1.64
TRIM3-201ENST00000345851 EPB41L2O43491 1005 aaKnown RBP25.3■■□□□ 1.64
TRIM3-201ENST00000345851 ZNF165P49910 485 aa25.29■■□□□ 1.64
TRIM3-201ENST00000345851 NLRP2Q9NX02 1062 aa25.29■■□□□ 1.64
TRIM3-201ENST00000345851 PDE4CQ08493 712 aa25.29■■□□□ 1.64
TRIM3-201ENST00000345851 SOS1Q07889 1333 aaPredicted RBP25.28■■□□□ 1.64
TRIM3-201ENST00000345851 PTH1RQ03431 593 aa25.28■■□□□ 1.64
TRIM3-201ENST00000345851 CNTROBQ8N137 903 aa25.28■■□□□ 1.64
TRIM3-201ENST00000345851 ZNF397Q8NF99 534 aaPredicted RBP25.28■■□□□ 1.64
TRIM3-201ENST00000345851 RGPD5Q99666 1765 aa25.28■■□□□ 1.64
TRIM3-201ENST00000345851 AOX1Q06278 1338 aa25.28■■□□□ 1.64
TRIM3-201ENST00000345851 TRPM3Q9HCF6 1732 aaPredicted RBP25.28■■□□□ 1.64
TRIM3-201ENST00000345851 HTATSF1O43719 755 aaKnown RBP25.27■■□□□ 1.64
TRIM3-201ENST00000345851 IRX5P78411 483 aaPredicted RBP25.27■■□□□ 1.64
TRIM3-201ENST00000345851 ELF2Q15723 593 aa25.27■■□□□ 1.64
TRIM3-201ENST00000345851 UBTFL1P0CB47 393 aaPredicted RBP25.27■■□□□ 1.64
TRIM3-201ENST00000345851 TRMT1Q9NXH9 659 aaKnown RBP25.27■■□□□ 1.64
TRIM3-201ENST00000345851 CCDC66A2RUB6 948 aa25.27■■□□□ 1.64
TRIM3-201ENST00000345851 FBXO38Q6PIJ6 1188 aa25.27■■□□□ 1.64
TRIM3-201ENST00000345851 CYP46A1Q9Y6A2 500 aa25.27■■□□□ 1.64
TRIM3-201ENST00000345851 ANXA1P04083 346 aa25.26■■□□□ 1.63
TRIM3-201ENST00000345851 RHPN1Q8TCX5 695 aa25.26■■□□□ 1.63
TRIM3-201ENST00000345851 SPATA32Q96LK8 384 aa25.26■■□□□ 1.63
TRIM3-201ENST00000345851 CSB-PGBD3P0DP91 1061 aa25.25■■□□□ 1.63
TRIM3-201ENST00000345851 PPP1R42Q7Z4L9 355 aa25.25■■□□□ 1.63
TRIM3-201ENST00000345851 TDRD7Q8NHU6 1098 aaKnown RBP25.25■■□□□ 1.63
TRIM3-201ENST00000345851 USP44Q9H0E7 712 aa25.25■■□□□ 1.63
TRIM3-201ENST00000345851 VPS53Q5VIR6 699 aa25.25■■□□□ 1.63
TRIM3-201ENST00000345851 KLHL34Q8N239 644 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms