RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MAK16Q9BXY0 300 aaKnown RBP20.09■□□□□ 0.81
SMAD4-201ENST00000342988 ST20-MTHFSA0A0A6YYL1 179 aa20.09■□□□□ 0.81
SMAD4-201ENST00000342988 LIG1P18858 919 aa20.09■□□□□ 0.81
SMAD4-201ENST00000342988 SRGAP1Q7Z6B7 1085 aa20.09■□□□□ 0.81
SMAD4-201ENST00000342988 IRX4P78413 519 aa20.09■□□□□ 0.81
SMAD4-201ENST00000342988 FYB2Q5VWT5 728 aa20.09■□□□□ 0.81
SMAD4-201ENST00000342988 HAUS7Q99871 368 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 NLRP2Q9NX02 1062 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 NEDD9Q14511 834 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 INPP1P49441 399 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 MICALL1Q8N3F8 863 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 JAKMIP1Q96N16 626 aaKnown RBP20.08■□□□□ 0.81
SMAD4-201ENST00000342988 AK9Q5TCS8 1911 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 CAMK4Q16566 473 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 INTS8Q75QN2 995 aaKnown RBP20.08■□□□□ 0.81
SMAD4-201ENST00000342988 ZC4H2Q9NQZ6 224 aa20.08■□□□□ 0.81
SMAD4-201ENST00000342988 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 ATP2C2O75185 946 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 C8orf76Q96K31 380 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 IMPG2Q9BZV3 1241 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 A6NNZ2 444 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 TUBB8Q3ZCM7 444 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 SH2B1Q9NRF2 756 aaPredicted RBP20.08■□□□□ 0.8
SMAD4-201ENST00000342988 BCAP29Q9UHQ4 241 aa20.08■□□□□ 0.8
SMAD4-201ENST00000342988 PCK1P35558 622 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 MCM6Q14566 821 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
SMAD4-201ENST00000342988 BICDL2A1A5D9 508 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 CYLC1P35663 651 aaPredicted RBP20.07■□□□□ 0.8
SMAD4-201ENST00000342988 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 FAM169AQ9Y6X4 670 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 ZNF652Q9Y2D9 606 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 KRT13P13646 458 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 PNISRQ8TF01 805 aaKnown RBP20.07■□□□□ 0.8
SMAD4-201ENST00000342988 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
SMAD4-201ENST00000342988 TSGA10Q9BZW7 698 aa20.06■□□□□ 0.8
SMAD4-201ENST00000342988 RSPH14Q9UHP6 348 aa20.06■□□□□ 0.8
SMAD4-201ENST00000342988 CATIPQ7Z7H3 387 aa20.06■□□□□ 0.8
SMAD4-201ENST00000342988 GPR161Q8N6U8 529 aaKnown RBP20.06■□□□□ 0.8
SMAD4-201ENST00000342988 SDCCAG8Q86SQ7 713 aaPredicted RBP20.06■□□□□ 0.8
SMAD4-201ENST00000342988 TRERF1Q96PN7 1200 aa20.06■□□□□ 0.8
SMAD4-201ENST00000342988 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
SMAD4-201ENST00000342988 TUBBP07437 444 aa20.06■□□□□ 0.8
SMAD4-201ENST00000342988 MTRF1LQ9UGC7 380 aaKnown RBP20.06■□□□□ 0.8
SMAD4-201ENST00000342988 MIER3Q7Z3K6 550 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 CCDC194A0A1B0GVG4 234 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 CCDC62Q6P9F0 684 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 EXOC1Q9NV70 894 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
SMAD4-201ENST00000342988 SSRP1Q08945 709 aaKnown RBP20.05■□□□□ 0.8
SMAD4-201ENST00000342988 AACSQ86V21 672 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 SRRTQ9BXP5 876 aaKnown RBP20.05■□□□□ 0.8
SMAD4-201ENST00000342988 DACT3Q96B18 629 aaPredicted RBP20.05■□□□□ 0.8
SMAD4-201ENST00000342988 TUBB4AP04350 444 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 HMOX1P09601 288 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 CETN3O15182 167 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 RPGRIP1LQ68CZ1 1315 aa20.05■□□□□ 0.8
SMAD4-201ENST00000342988 ERMNQ8TAM6 284 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 RNF41Q9H4P4 317 aaPredicted RBP20.04■□□□□ 0.8
SMAD4-201ENST00000342988 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
SMAD4-201ENST00000342988 ZNF365Q70YC5 407 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 ARFGAP2Q8N6H7 521 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 ATF7IPQ6VMQ6 1270 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 CSRNP2Q9H175 543 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 SAMM50Q9Y512 469 aa20.04■□□□□ 0.8
SMAD4-201ENST00000342988 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
SMAD4-201ENST00000342988 CUX1P39880 1505 aa20.03■□□□□ 0.8
SMAD4-201ENST00000342988 EIF2AQ9BY44 585 aaKnown RBP20.03■□□□□ 0.8
SMAD4-201ENST00000342988 MYO1BO43795 1136 aa20.03■□□□□ 0.8
SMAD4-201ENST00000342988 CLUL1Q15846 466 aa20.03■□□□□ 0.8
SMAD4-201ENST00000342988 MPNDQ8N594 471 aa20.03■□□□□ 0.8
SMAD4-201ENST00000342988 SLC12A7Q9Y666 1083 aa20.03■□□□□ 0.8
SMAD4-201ENST00000342988 TBCAO75347 108 aaKnown RBP20.03■□□□□ 0.8
SMAD4-201ENST00000342988 SELENOSQ9BQE4 189 aa20.03■□□□□ 0.8
SMAD4-201ENST00000342988 SPTY2D1Q68D10 685 aaPredicted RBP20.02■□□□□ 0.8
SMAD4-201ENST00000342988 ANKFY1Q9P2R3 1169 aa20.02■□□□□ 0.8
SMAD4-201ENST00000342988 BUB1BO60566 1050 aaPredicted RBP20.02■□□□□ 0.8
SMAD4-201ENST00000342988 CAPN2P17655 700 aa20.02■□□□□ 0.8
SMAD4-201ENST00000342988 HDAC9Q9UKV0 1011 aa20.02■□□□□ 0.8
SMAD4-201ENST00000342988 NACADO15069 1562 aa20.02■□□□□ 0.79
SMAD4-201ENST00000342988 CWC27Q6UX04 472 aaKnown RBP20.02■□□□□ 0.79
SMAD4-201ENST00000342988 NAPBQ9H115 298 aa20.02■□□□□ 0.79
SMAD4-201ENST00000342988 RIOK3O14730 519 aaKnown RBP20.01■□□□□ 0.79
SMAD4-201ENST00000342988 TMC6Q7Z403 805 aa20.01■□□□□ 0.79
SMAD4-201ENST00000342988 WDR46O15213 610 aaKnown RBP20.01■□□□□ 0.79
SMAD4-201ENST00000342988 TTLL12Q14166 644 aaPredicted RBP20.01■□□□□ 0.79
SMAD4-201ENST00000342988 GKAP1Q5VSY0 366 aaPredicted RBP20.01■□□□□ 0.79
SMAD4-201ENST00000342988 MAP3K21Q5TCX8 1036 aa20.01■□□□□ 0.79
SMAD4-201ENST00000342988 NKIRAS1Q9NYS0 192 aa20.01■□□□□ 0.79
SMAD4-201ENST00000342988 PHACTR2O75167 634 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 NLRP5P59047 1200 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 TRAF3IP1Q8TDR0 691 aaPredicted RBP20■□□□□ 0.79
SMAD4-201ENST00000342988 ZFP91Q96JP5 570 aaPredicted RBP20■□□□□ 0.79
SMAD4-201ENST00000342988 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 FCHSD2O94868 740 aa20■□□□□ 0.79
SMAD4-201ENST00000342988 PDCD2Q16342 344 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms