RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 OTUD6BQ8N6M0 293 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 MYCBPQ99417 103 aaPredicted RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 IL16Q14005 1332 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 FSD2A1L4K1 749 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 HOMER2Q9NSB8 354 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 SPG7Q9UQ90 795 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 A0A1W2PRG0 241 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 PHACTR2O75167 634 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 CTNNA2P26232 953 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 CCDC121Q6ZUS5 278 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 ZSCAN29Q8IWY8 852 aaPredicted RBP8.55□□□□□ -1.04
LMO7-202ENST00000341547 ZEB2O60315 1214 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 ZMYM3Q14202 1370 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 RRS1Q15050 365 aaKnown RBP8.55□□□□□ -1.04
LMO7-202ENST00000341547 GTF3C6Q969F1 213 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 TYRO3Q06418 890 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 PRAM1Q96QH2 718 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 CPSF2Q9P2I0 782 aaKnown RBP8.55□□□□□ -1.04
LMO7-202ENST00000341547 SARNPP82979 210 aaKnown RBP8.55□□□□□ -1.04
LMO7-202ENST00000341547 NSRP1Q9H0G5 558 aaKnown RBP8.55□□□□□ -1.04
LMO7-202ENST00000341547 PARD3Q8TEW0 1356 aa8.55□□□□□ -1.04
LMO7-202ENST00000341547 A0A1B0GUA9 196 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 BTBD11A6QL63 1104 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 MPHOSPH10O00566 681 aaKnown RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 PHAXQ9H814 394 aaKnown RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 CABP4P57796 275 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 CCDC50Q8IVM0 306 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 TSHZ3Q63HK5 1081 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 DAAM2Q86T65 1068 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 C6orf163Q5TEZ5 329 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 TRMT1LQ7Z2T5 733 aaKnown RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 TTC16Q8NEE8 873 aa8.54□□□□□ -1.04
LMO7-202ENST00000341547 CCDC8Q9H0W5 538 aaPredicted RBP8.54□□□□□ -1.04
LMO7-202ENST00000341547 PTPRCP08575 1304 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 TUBB2AQ13885 445 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 TUBB2BQ9BVA1 445 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
LMO7-202ENST00000341547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■□□□ 13.2
LMO7-202ENST00000341547 ATF3P18847 181 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 MXRA7P84157 204 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 TCERG1LQ5VWI1 586 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 CTAGE9A4FU28 777 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 B4GALNT4Q76KP1 1039 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 FAM76AQ8TAV0 307 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 ARHGAP5Q13017 1502 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 SYT1P21579 422 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 SYT10Q6XYQ8 523 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 AFAP1L1Q8TED9 768 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 SEC63Q9UGP8 760 aaKnown RBP8.53□□□□□ -1.04
LMO7-202ENST00000341547 ZMYM4Q5VZL5 1548 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 A6NNZ2 444 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 TUBB8Q3ZCM7 444 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 APBB1IPQ7Z5R6 666 aaPredicted RBP8.53□□□□□ -1.04
LMO7-202ENST00000341547 RAB11FIP4Q86YS3 637 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 CABP1Q9NZU7 370 aa8.53□□□□□ -1.04
LMO7-202ENST00000341547 NSD2O96028 1365 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 INSRP06213 1382 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 F6X3S4 739 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 ZNF213O14771 459 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 SEC24BO95487 1268 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 NAA25Q14CX7 972 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 ARHGAP45Q92619 1136 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 CTAGE1Q96RT6 745 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 CDK19Q9BWU1 502 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 NAPBQ9H115 298 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 DNAJC25Q9H1X3 360 aa8.52□□□□□ -1.04
LMO7-202ENST00000341547 CAMSAP2Q08AD1 1489 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 FAM160A1Q05DH4 1040 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 SSRP1Q08945 709 aaKnown RBP8.52□□□□□ -1.05
LMO7-202ENST00000341547 PPP1R14CQ8TAE6 165 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 TRIM21P19474 475 aaKnown RBP8.52□□□□□ -1.05
LMO7-202ENST00000341547 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.05
LMO7-202ENST00000341547 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 ANKS4BQ8N8V4 417 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 HMG20BQ9P0W2 317 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 PTPRGP23470 1445 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 N4BP3O15049 544 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
LMO7-202ENST00000341547 NECAB1Q8N987 351 aa8.52□□□□□ -1.05
LMO7-202ENST00000341547 PUF60Q9UHX1 559 aaKnown RBP8.52□□□□□ -1.05
LMO7-202ENST00000341547 METTL24Q5JXM2 366 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 AOPEPQ8N6M6 819 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 MMRN2Q9H8L6 949 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 MKNK2Q9HBH9 465 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 SLC12A7Q9Y666 1083 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 KIF4AO95239 1232 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 NLRP5P59047 1200 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 SMIM23A6NLE4 172 aa8.51□□□□□ -1.05
LMO7-202ENST00000341547 ZBTB16Q05516 673 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms