RNA–Protein interactions for RNA: ENST00000341355.9

RAP1B-202, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAP1B, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-202ENST00000341355 COL11A2P13942 1736 aaPredicted RBP27.31■■□□□ 1.96
RAP1B-202ENST00000341355 RIC3Q7Z5B4 369 aa27.3■■□□□ 1.96
RAP1B-202ENST00000341355 ISCA1Q9BUE6 129 aa27.3■■□□□ 1.96
RAP1B-202ENST00000341355 ABCC12Q96J65 1359 aa27.3■■□□□ 1.96
RAP1B-202ENST00000341355 ANKRD36CQ5JPF3 1778 aa27.3■■□□□ 1.96
RAP1B-202ENST00000341355 DIEXFQ68CQ4 756 aaKnown RBP27.29■■□□□ 1.96
RAP1B-202ENST00000341355 PRPF40BQ6NWY9 871 aaKnown RBP27.29■■□□□ 1.96
RAP1B-202ENST00000341355 NLRP3Q96P20 1036 aa27.29■■□□□ 1.96
RAP1B-202ENST00000341355 PHAXQ9H814 394 aaKnown RBP27.29■■□□□ 1.96
RAP1B-202ENST00000341355 HOXA10P31260 410 aaPredicted RBP27.28■■□□□ 1.96
RAP1B-202ENST00000341355 SH3TC1Q8TE82 1336 aa27.27■■□□□ 1.96
RAP1B-202ENST00000341355 VAMP4O75379 141 aa27.27■■□□□ 1.96
RAP1B-202ENST00000341355 TRMT112Q9UI30 125 aaKnown RBP27.27■■□□□ 1.96
RAP1B-202ENST00000341355 C21orf2O43822 256 aa27.26■■□□□ 1.95
RAP1B-202ENST00000341355 SPINK5Q9NQ38 1064 aaPredicted RBP27.26■■□□□ 1.95
RAP1B-202ENST00000341355 ARFGEF2Q9Y6D5 1785 aa27.26■■□□□ 1.95
RAP1B-202ENST00000341355 ZC3H4Q9UPT8 1303 aaKnown RBP27.25■■□□□ 1.95
RAP1B-202ENST00000341355 EXOSC9Q06265 439 aaKnown RBP27.25■■□□□ 1.95
RAP1B-202ENST00000341355 C9orf131Q5VYM1 1079 aa27.25■■□□□ 1.95
RAP1B-202ENST00000341355 C7orf43Q8WVR3 580 aa27.25■■□□□ 1.95
RAP1B-202ENST00000341355 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
RAP1B-202ENST00000341355 LTBP3Q9NS15 1303 aa27.24■■□□□ 1.95
RAP1B-202ENST00000341355 SLC4A2P04920 1241 aa27.24■■□□□ 1.95
RAP1B-202ENST00000341355 LMNB1P20700 586 aa27.24■■□□□ 1.95
RAP1B-202ENST00000341355 CRAMP1Q96RY5 1269 aa27.24■■□□□ 1.95
RAP1B-202ENST00000341355 KSR2Q6VAB6 950 aa27.23■■□□□ 1.95
RAP1B-202ENST00000341355 RBM17Q96I25 401 aaKnown RBP27.23■■□□□ 1.95
RAP1B-202ENST00000341355 SLX4Q8IY92 1834 aa27.23■■□□□ 1.95
RAP1B-202ENST00000341355 GRIPAP1Q4V328 841 aa27.22■■□□□ 1.95
RAP1B-202ENST00000341355 CC2D2BQ6DHV5 1058 aa27.22■■□□□ 1.95
RAP1B-202ENST00000341355 METTL22Q9BUU2 404 aaPredicted RBP27.22■■□□□ 1.95
RAP1B-202ENST00000341355 TNRC6CQ9HCJ0 1690 aaKnown RBP27.21■■□□□ 1.95
RAP1B-202ENST00000341355 E9PSI1 815 aa27.21■■□□□ 1.95
RAP1B-202ENST00000341355 ATP5J2-PTCD1G3V325 749 aa27.21■■□□□ 1.95
RAP1B-202ENST00000341355 NFKBIEO00221 500 aa27.21■■□□□ 1.95
RAP1B-202ENST00000341355 HSP90B1P14625 803 aaKnown RBP27.21■■□□□ 1.95
RAP1B-202ENST00000341355 CCDC93Q567U6 631 aa27.21■■□□□ 1.95
RAP1B-202ENST00000341355 CCDC191Q8NCU4 936 aa27.21■■□□□ 1.95
RAP1B-202ENST00000341355 RNF181Q9P0P0 153 aa27.21■■□□□ 1.95
RAP1B-202ENST00000341355 RTKN2Q8IZC4 609 aa27.2■■□□□ 1.94
RAP1B-202ENST00000341355 TAOK3Q9H2K8 898 aa27.2■■□□□ 1.94
RAP1B-202ENST00000341355 GPBP1L1Q9HC44 474 aaPredicted RBP27.2■■□□□ 1.94
RAP1B-202ENST00000341355 CACNA1FO60840 1977 aa27.19■■□□□ 1.94
RAP1B-202ENST00000341355 RASSF7Q02833 373 aa27.19■■□□□ 1.94
RAP1B-202ENST00000341355 SBF1O95248 1867 aa27.19■■□□□ 1.94
RAP1B-202ENST00000341355 PI4KAP2A4QPH2 592 aa27.18■■□□□ 1.94
RAP1B-202ENST00000341355 PI4KAP1Q8N8J0 262 aa27.18■■□□□ 1.94
RAP1B-202ENST00000341355 ZBTB38Q8NAP3 1195 aaPredicted RBP27.18■■□□□ 1.94
RAP1B-202ENST00000341355 MYD88Q99836 296 aa27.18■■□□□ 1.94
RAP1B-202ENST00000341355 ZNF219Q9P2Y4 722 aaPredicted RBP27.18■■□□□ 1.94
RAP1B-202ENST00000341355 MAP3K2Q9Y2U5 619 aa27.18■■□□□ 1.94
RAP1B-202ENST00000341355 FER1L6Q2WGJ9 1857 aa27.17■■□□□ 1.94
RAP1B-202ENST00000341355 NEXNQ0ZGT2 675 aa27.17■■□□□ 1.94
RAP1B-202ENST00000341355 HCLS1P14317 486 aaPredicted RBP27.16■■□□□ 1.94
RAP1B-202ENST00000341355 FLIIQ13045 1269 aa27.16■■□□□ 1.94
RAP1B-202ENST00000341355 C3orf67Q6ZVT6 689 aa27.16■■□□□ 1.94
RAP1B-202ENST00000341355 CWC25Q9NXE8 425 aaPredicted RBP27.16■■□□□ 1.94
RAP1B-202ENST00000341355 TCERG1O14776 1098 aaKnown RBP27.15■■□□□ 1.94
RAP1B-202ENST00000341355 SF3B3Q15393 1217 aaKnown RBP27.15■■□□□ 1.94
RAP1B-202ENST00000341355 MIER1Q8N108 512 aa27.15■■□□□ 1.94
RAP1B-202ENST00000341355 SYNE4Q8N205 404 aa27.15■■□□□ 1.94
RAP1B-202ENST00000341355 FAM89AQ96GI7 184 aa27.15■■□□□ 1.94
RAP1B-202ENST00000341355 BBOX1O75936 387 aa27.14■■□□□ 1.94
RAP1B-202ENST00000341355 FKBP4Q02790 459 aaKnown RBP eCLIP27.14■■□□□ 1.94
RAP1B-202ENST00000341355 SLFN5Q08AF3 891 aa27.14■■□□□ 1.94
RAP1B-202ENST00000341355 G2E3Q7L622 706 aa27.14■■□□□ 1.94
RAP1B-202ENST00000341355 PCCAP05165 728 aaPredicted RBP27.13■■□□□ 1.93
RAP1B-202ENST00000341355 PRELPP51888 382 aa27.13■■□□□ 1.93
RAP1B-202ENST00000341355 DDX46Q7L014 1031 aaKnown RBP27.13■■□□□ 1.93
RAP1B-202ENST00000341355 ZNF428Q96B54 188 aa27.13■■□□□ 1.93
RAP1B-202ENST00000341355 TMX4Q9H1E5 349 aaPredicted RBP27.13■■□□□ 1.93
RAP1B-202ENST00000341355 CACNA1SQ13698 1873 aa27.13■■□□□ 1.93
RAP1B-202ENST00000341355 IRS4O14654 1257 aaPredicted RBP27.12■■□□□ 1.93
RAP1B-202ENST00000341355 FKBP5Q13451 457 aaPredicted RBP27.12■■□□□ 1.93
RAP1B-202ENST00000341355 PSMD1Q99460 953 aa27.12■■□□□ 1.93
RAP1B-202ENST00000341355 KDM2BQ8NHM5 1336 aa27.12■■□□□ 1.93
RAP1B-202ENST00000341355 PPEF1O14829 653 aaPredicted RBP27.11■■□□□ 1.93
RAP1B-202ENST00000341355 TMC4Q7Z404 712 aa27.11■■□□□ 1.93
RAP1B-202ENST00000341355 ABCC4O15439 1325 aa27.11■■□□□ 1.93
RAP1B-202ENST00000341355 TRMT2AQ8IZ69 625 aaKnown RBP27.1■■□□□ 1.93
RAP1B-202ENST00000341355 ZNF526Q8TF50 670 aaPredicted RBP27.1■■□□□ 1.93
RAP1B-202ENST00000341355 ATP6V0A2Q9Y487 856 aa27.1■■□□□ 1.93
RAP1B-202ENST00000341355 IGKV5-2P06315 115 aa27.09■■□□□ 1.93
RAP1B-202ENST00000341355 GRAPQ13588 217 aa27.09■■□□□ 1.93
RAP1B-202ENST00000341355 GRAPLQ8TC17 118 aaPredicted RBP27.09■■□□□ 1.93
RAP1B-202ENST00000341355 DNAAF4Q8WXU2 420 aa27.09■■□□□ 1.93
RAP1B-202ENST00000341355 CDHR2Q9BYE9 1310 aa27.09■■□□□ 1.93
RAP1B-202ENST00000341355 SNED1Q8TER0 1413 aa27.08■■□□□ 1.93
RAP1B-202ENST00000341355 GLTPD2A6NH11 291 aa27.07■■□□□ 1.92
RAP1B-202ENST00000341355 NEURL1BA8MQ27 555 aa27.07■■□□□ 1.92
RAP1B-202ENST00000341355 SP8Q8IXZ3 490 aa27.07■■□□□ 1.92
RAP1B-202ENST00000341355 DDX60Q8IY21 1712 aaKnown RBP27.07■■□□□ 1.92
RAP1B-202ENST00000341355 LAMB2P55268 1798 aa27.07■■□□□ 1.92
RAP1B-202ENST00000341355 PDE8AO60658 829 aa27.06■■□□□ 1.92
RAP1B-202ENST00000341355 CT47B1P0C2W7 299 aaPredicted RBP27.06■■□□□ 1.92
RAP1B-202ENST00000341355 DPY19L2Q6NUT2 758 aa27.06■■□□□ 1.92
RAP1B-202ENST00000341355 LINS1Q8NG48 757 aa27.06■■□□□ 1.92
RAP1B-202ENST00000341355 VPS33BQ9H267 617 aa27.06■■□□□ 1.92
RAP1B-202ENST00000341355 DICER1Q9UPY3 1922 aaKnown RBP27.06■■□□□ 1.92
RAP1B-202ENST00000341355 RTL5Q5HYW3 569 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms