RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 MAP3K2Q9Y2U5 619 aa18.18■□□□□ 0.5
CTSL-201ENST00000340342 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
CTSL-201ENST00000340342 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
CTSL-201ENST00000340342 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
CTSL-201ENST00000340342 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
CTSL-201ENST00000340342 TNRC6CQ9HCJ0 1690 aaKnown RBP18.17■□□□□ 0.5
CTSL-201ENST00000340342 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
CTSL-201ENST00000340342 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
CTSL-201ENST00000340342 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
CTSL-201ENST00000340342 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
CTSL-201ENST00000340342 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
CTSL-201ENST00000340342 MYD88Q99836 296 aa18.16■□□□□ 0.5
CTSL-201ENST00000340342 NTSR2O95665 410 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
CTSL-201ENST00000340342 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 ABCC12Q96J65 1359 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 CACNA1SQ13698 1873 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 KLRG2A4D1S0 409 aaPredicted RBP18.15■□□□□ 0.5
CTSL-201ENST00000340342 ERFEQ4G0M1 354 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 ARHGAP27Q6ZUM4 889 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 PPP1R42Q7Z4L9 355 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
CTSL-201ENST00000340342 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
CTSL-201ENST00000340342 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.5
CTSL-201ENST00000340342 LAMB2P55268 1798 aa18.14■□□□□ 0.49
CTSL-201ENST00000340342 F6X3S4 739 aa18.14■□□□□ 0.49
CTSL-201ENST00000340342 SRGNP10124 158 aa18.14■□□□□ 0.49
CTSL-201ENST00000340342 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
CTSL-201ENST00000340342 ZNF622Q969S3 477 aaKnown RBP eCLIP18.14■□□□□ 0.494e-7■■□□□ 11.9
CTSL-201ENST00000340342 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
CTSL-201ENST00000340342 STYK1Q6J9G0 422 aa18.13■□□□□ 0.49
CTSL-201ENST00000340342 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
CTSL-201ENST00000340342 MASTLQ96GX5 879 aa18.13■□□□□ 0.49
CTSL-201ENST00000340342 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
CTSL-201ENST00000340342 DDX60Q8IY21 1712 aaKnown RBP18.13■□□□□ 0.49
CTSL-201ENST00000340342 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
CTSL-201ENST00000340342 DNAAF4Q8WXU2 420 aa18.12■□□□□ 0.49
CTSL-201ENST00000340342 CNKSR1Q969H4 720 aa18.12■□□□□ 0.49
CTSL-201ENST00000340342 TRMT112Q9UI30 125 aaKnown RBP18.12■□□□□ 0.49
CTSL-201ENST00000340342 NPR1P16066 1061 aa18.11■□□□□ 0.49
CTSL-201ENST00000340342 TRIM28Q13263 835 aaKnown RBP18.11■□□□□ 0.49
CTSL-201ENST00000340342 CWF19L2Q2TBE0 894 aaKnown RBP18.11■□□□□ 0.49
CTSL-201ENST00000340342 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
CTSL-201ENST00000340342 ZNF784Q8NCA9 323 aaPredicted RBP18.1■□□□□ 0.49
CTSL-201ENST00000340342 RNF123Q5XPI4 1314 aa18.1■□□□□ 0.49
CTSL-201ENST00000340342 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
CTSL-201ENST00000340342 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
CTSL-201ENST00000340342 JARID2Q92833 1246 aaPredicted RBP18.09■□□□□ 0.49
CTSL-201ENST00000340342 FAM89AQ96GI7 184 aa18.09■□□□□ 0.49
CTSL-201ENST00000340342 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
CTSL-201ENST00000340342 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
CTSL-201ENST00000340342 NEURL1BA8MQ27 555 aa18.08■□□□□ 0.49
CTSL-201ENST00000340342 BCAR3O75815 825 aa18.08■□□□□ 0.49
CTSL-201ENST00000340342 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.49
CTSL-201ENST00000340342 ALDH1B1P30837 517 aa18.08■□□□□ 0.49
CTSL-201ENST00000340342 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.49
CTSL-201ENST00000340342 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.49
CTSL-201ENST00000340342 PTPRCP08575 1304 aa18.08■□□□□ 0.48
CTSL-201ENST00000340342 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.48
CTSL-201ENST00000340342 CRY2Q49AN0 593 aa18.07■□□□□ 0.48
CTSL-201ENST00000340342 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
CTSL-201ENST00000340342 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
CTSL-201ENST00000340342 SLX4Q8IY92 1834 aa18.07■□□□□ 0.48
CTSL-201ENST00000340342 TAF1P21675 1872 aa18.07■□□□□ 0.48
CTSL-201ENST00000340342 BEND3Q5T5X7 828 aa18.06■□□□□ 0.48
CTSL-201ENST00000340342 NLRP3Q96P20 1036 aa18.06■□□□□ 0.48
CTSL-201ENST00000340342 SBF1O95248 1867 aa18.06■□□□□ 0.48
CTSL-201ENST00000340342 MYH3P11055 1940 aa18.06■□□□□ 0.48
CTSL-201ENST00000340342 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
CTSL-201ENST00000340342 SOGA3Q5TF21 947 aa18.06■□□□□ 0.48
CTSL-201ENST00000340342 PRPF40BQ6NWY9 871 aaKnown RBP18.06■□□□□ 0.48
CTSL-201ENST00000340342 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
CTSL-201ENST00000340342 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
CTSL-201ENST00000340342 C21orf2O43822 256 aa18.05■□□□□ 0.48
CTSL-201ENST00000340342 HOXA10P31260 410 aaPredicted RBP18.05■□□□□ 0.48
CTSL-201ENST00000340342 GCKRQ14397 625 aa18.05■□□□□ 0.48
CTSL-201ENST00000340342 IRS4O14654 1257 aaPredicted RBP18.04■□□□□ 0.48
CTSL-201ENST00000340342 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
CTSL-201ENST00000340342 RPGRQ92834 1020 aaKnown RBP18.04■□□□□ 0.48
CTSL-201ENST00000340342 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
CTSL-201ENST00000340342 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
CTSL-201ENST00000340342 C7orf43Q8WVR3 580 aa18.03■□□□□ 0.48
CTSL-201ENST00000340342 FRAT1Q92837 279 aaPredicted RBP18.03■□□□□ 0.48
CTSL-201ENST00000340342 FER1L6Q2WGJ9 1857 aa18.02■□□□□ 0.48
CTSL-201ENST00000340342 CCDC88AQ3V6T2 1871 aa18.02■□□□□ 0.48
CTSL-201ENST00000340342 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
CTSL-201ENST00000340342 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
CTSL-201ENST00000340342 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
CTSL-201ENST00000340342 CRAMP1Q96RY5 1269 aa18.02■□□□□ 0.48
CTSL-201ENST00000340342 ZNF219Q9P2Y4 722 aaPredicted RBP18.02■□□□□ 0.48
CTSL-201ENST00000340342 LMNB1P20700 586 aa18.01■□□□□ 0.47
CTSL-201ENST00000340342 SRCIN1Q9C0H9 1055 aa18.01■□□□□ 0.47
CTSL-201ENST00000340342 TNNQ9UQP3 1299 aa18.01■□□□□ 0.47
CTSL-201ENST00000340342 H7C1W4 665 aa18■□□□□ 0.47
CTSL-201ENST00000340342 RNF181Q9P0P0 153 aa18■□□□□ 0.47
CTSL-201ENST00000340342 COL4A1P02462 1669 aa18■□□□□ 0.47
CTSL-201ENST00000340342 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
CTSL-201ENST00000340342 LTBP3Q9NS15 1303 aa17.99■□□□□ 0.47
CTSL-201ENST00000340342 NFKBIEO00221 500 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms