RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 C16orf71Q8IYS4 520 aaPredicted RBP18.21■□□□□ 0.51
CBX3-201ENST00000337620 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
CBX3-201ENST00000337620 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
CBX3-201ENST00000337620 ZNF34Q8IZ26 560 aa18.2■□□□□ 0.5
CBX3-201ENST00000337620 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
CBX3-201ENST00000337620 PCCAP05165 728 aaPredicted RBP18.2■□□□□ 0.5
CBX3-201ENST00000337620 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
CBX3-201ENST00000337620 LMBR1LQ6UX01 489 aa18.2■□□□□ 0.5
CBX3-201ENST00000337620 AK7Q96M32 723 aa18.2■□□□□ 0.5
CBX3-201ENST00000337620 PA2G4Q9UQ80 394 aaKnown RBP18.2■□□□□ 0.5
CBX3-201ENST00000337620 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
CBX3-201ENST00000337620 APBA3O96018 575 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 FOXO4P98177 505 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
CBX3-201ENST00000337620 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
CBX3-201ENST00000337620 TRMT112Q9UI30 125 aaKnown RBP18.19■□□□□ 0.5
CBX3-201ENST00000337620 ZNF652Q9Y2D9 606 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 CHMP3Q9Y3E7 222 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 UBN2Q6ZU65 1347 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 HSP90AB4PQ58FF6 505 aa18.19■□□□□ 0.5
CBX3-201ENST00000337620 ANKRD36CQ5JPF3 1778 aa18.18■□□□□ 0.5
CBX3-201ENST00000337620 FAM177BA6PVY3 158 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
CBX3-201ENST00000337620 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
CBX3-201ENST00000337620 C4BP0C0L5 1744 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 PHF14O94880 888 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 CLEC4GQ6UXB4 293 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 KLHDC4Q8TBB5 520 aa18.17■□□□□ 0.5
CBX3-201ENST00000337620 ZPR1O75312 459 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 SUSD4Q5VX71 490 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 RHPN1Q8TCX5 695 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
CBX3-201ENST00000337620 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
CBX3-201ENST00000337620 SIL1Q9H173 461 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
CBX3-201ENST00000337620 TRAPPC3LQ5T215 181 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 PROM2Q8N271 834 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 SRP68Q9UHB9 627 aaKnown RBP18.16■□□□□ 0.5
CBX3-201ENST00000337620 NARFQ9UHQ1 456 aa18.16■□□□□ 0.5
CBX3-201ENST00000337620 PLSCR1O15162 318 aa18.15■□□□□ 0.5
CBX3-201ENST00000337620 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
CBX3-201ENST00000337620 IRS4O14654 1257 aaPredicted RBP18.14■□□□□ 0.5
CBX3-201ENST00000337620 UTP14AQ9BVJ6 771 aaKnown RBP18.14■□□□□ 0.5
CBX3-201ENST00000337620 CDHR2Q9BYE9 1310 aa18.14■□□□□ 0.49
CBX3-201ENST00000337620 RFC4P35249 363 aa18.14■□□□□ 0.49
CBX3-201ENST00000337620 RFX5P48382 616 aaPredicted RBP18.14■□□□□ 0.49
CBX3-201ENST00000337620 PTPN12Q05209 780 aaKnown RBP18.13■□□□□ 0.49
CBX3-201ENST00000337620 C8orf34Q49A92 452 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 ERC1Q8IUD2 1116 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
CBX3-201ENST00000337620 PLA2G12BQ9BX93 195 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 BCORQ6W2J9 1755 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 BCL2L12Q9HB09 334 aa18.13■□□□□ 0.49
CBX3-201ENST00000337620 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
CBX3-201ENST00000337620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
CBX3-201ENST00000337620 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
CBX3-201ENST00000337620 HMGB2P26583 209 aaKnown RBP18.11■□□□□ 0.49
CBX3-201ENST00000337620 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
CBX3-201ENST00000337620 RBM19Q9Y4C8 960 aaKnown RBP18.11■□□□□ 0.49
CBX3-201ENST00000337620 RGL2O15211 777 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 PDE8AO60658 829 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 SASH1O94885 1247 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 CSF1RP07333 972 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 NTSR2O95665 410 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 HCLS1P14317 486 aaPredicted RBP18.1■□□□□ 0.49
CBX3-201ENST00000337620 ADRA2BP18089 450 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 CTSWP56202 376 aa18.1■□□□□ 0.49
CBX3-201ENST00000337620 CLASRPQ8N2M8 674 aaKnown RBP18.1■□□□□ 0.49
CBX3-201ENST00000337620 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
CBX3-201ENST00000337620 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
CBX3-201ENST00000337620 MX1P20591 662 aa18.09■□□□□ 0.49
CBX3-201ENST00000337620 PDE1AP54750 535 aa18.09■□□□□ 0.49
CBX3-201ENST00000337620 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
CBX3-201ENST00000337620 TTLL11Q8NHH1 800 aa18.09■□□□□ 0.49
CBX3-201ENST00000337620 ZNF594Q96JF6 807 aaPredicted RBP18.09■□□□□ 0.49
CBX3-201ENST00000337620 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
CBX3-201ENST00000337620 IFIT5Q13325 482 aaKnown RBP18.08■□□□□ 0.49
CBX3-201ENST00000337620 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.49
CBX3-201ENST00000337620 SSFA2P28290 1259 aa18.08■□□□□ 0.48
CBX3-201ENST00000337620 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
CBX3-201ENST00000337620 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
CBX3-201ENST00000337620 GREM2Q9H772 168 aa18.07■□□□□ 0.48
CBX3-201ENST00000337620 SALL3Q9BXA9 1300 aa18.07■□□□□ 0.48
CBX3-201ENST00000337620 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
CBX3-201ENST00000337620 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
CBX3-201ENST00000337620 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
CBX3-201ENST00000337620 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms