RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 TRMT1Q9NXH9 659 aaKnown RBP18.28■□□□□ 0.52
HDAC5-202ENST00000336057 ZKSCAN5Q9Y2L8 839 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 NCKAP5LQ9HCH0 1330 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 DYNC1I1O14576 645 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 DNM1Q05193 864 aaKnown RBP18.28■□□□□ 0.52
HDAC5-202ENST00000336057 LDHAL6AQ6ZMR3 332 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 AK2P54819 239 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 PKNOX2Q96KN3 472 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
HDAC5-202ENST00000336057 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
HDAC5-202ENST00000336057 MAP3K5Q99683 1374 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 BIN1O00499 593 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
HDAC5-202ENST00000336057 TTF1Q15361 905 aaPredicted RBP18.27■□□□□ 0.52
HDAC5-202ENST00000336057 CCDC181Q5TID7 509 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 KLHL10Q6JEL2 608 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 TMCO3Q6UWJ1 677 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 NCOA7Q8NI08 942 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 FAM200AQ8TCP9 573 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 CAVIN4Q5BKX8 364 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 IARSP41252 1262 aaKnown RBP18.27■□□□□ 0.52
HDAC5-202ENST00000336057 EIF5P55010 431 aaKnown RBP18.27■□□□□ 0.52
HDAC5-202ENST00000336057 KDM5CP41229 1560 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
HDAC5-202ENST00000336057 PPFIA3O75145 1194 aa18.27■□□□□ 0.51
HDAC5-202ENST00000336057 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.51
HDAC5-202ENST00000336057 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.51
HDAC5-202ENST00000336057 MYO6Q9UM54 1294 aa18.27■□□□□ 0.51
HDAC5-202ENST00000336057 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 URI1O94763 535 aaPredicted RBP18.26■□□□□ 0.51
HDAC5-202ENST00000336057 GPTP24298 496 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
HDAC5-202ENST00000336057 HS1BP3Q53T59 392 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 BMP2KQ9NSY1 1161 aaPredicted RBP18.26■□□□□ 0.51
HDAC5-202ENST00000336057 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 MCMDC2Q4G0Z9 681 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 G2E3Q7L622 706 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 CTCFLQ8NI51 663 aaPredicted RBP18.26■□□□□ 0.51
HDAC5-202ENST00000336057 ZHX3Q9H4I2 956 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 CBX1P83916 185 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
HDAC5-202ENST00000336057 ZNF830Q96NB3 372 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-202ENST00000336057 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-202ENST00000336057 DACT1Q9NYF0 836 aa18.25■□□□□ 0.51
HDAC5-202ENST00000336057 TMC6Q7Z403 805 aa18.25■□□□□ 0.51
HDAC5-202ENST00000336057 LRRC2Q9BYS8 371 aa18.25■□□□□ 0.51
HDAC5-202ENST00000336057 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
HDAC5-202ENST00000336057 CHL1O00533 1208 aa18.25■□□□□ 0.51
HDAC5-202ENST00000336057 SLC39A6Q13433 755 aa18.25■□□□□ 0.51
HDAC5-202ENST00000336057 NOLC1Q14978 699 aaKnown RBP eCLIP18.25■□□□□ 0.51
HDAC5-202ENST00000336057 CGNQ9P2M7 1197 aaKnown RBP18.25■□□□□ 0.51
HDAC5-202ENST00000336057 MAGI2Q86UL8 1455 aa18.24■□□□□ 0.51
HDAC5-202ENST00000336057 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
HDAC5-202ENST00000336057 ANO6Q4KMQ2 910 aa18.24■□□□□ 0.51
HDAC5-202ENST00000336057 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-202ENST00000336057 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-202ENST00000336057 METAP2P50579 478 aaKnown RBP eCLIP18.24■□□□□ 0.516e-7■□□□□ 11
HDAC5-202ENST00000336057 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
HDAC5-202ENST00000336057 MICU3Q86XE3 530 aa18.24■□□□□ 0.51
HDAC5-202ENST00000336057 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-202ENST00000336057 IQCEQ6IPM2 695 aa18.24■□□□□ 0.51
HDAC5-202ENST00000336057 H0YHG0 523 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 SSBP05455 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
HDAC5-202ENST00000336057 ZFYP08048 801 aaPredicted RBP18.23■□□□□ 0.51
HDAC5-202ENST00000336057 ODF2Q5BJF6 829 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 LMBR1LQ6UX01 489 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 Q6ZUG5 572 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 KIAA1328Q86T90 577 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 KLF18A0A0U1RQI7 1052 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 RAB11FIP4Q86YS3 637 aa18.23■□□□□ 0.51
HDAC5-202ENST00000336057 PATL2C9JE40 543 aaKnown RBP18.22■□□□□ 0.51
HDAC5-202ENST00000336057 KIF5CO60282 957 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 CWF19L2Q2TBE0 894 aaKnown RBP18.22■□□□□ 0.51
HDAC5-202ENST00000336057 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
HDAC5-202ENST00000336057 CASQ1P31415 396 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 CCDC144CPQ8IYA2 1237 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
HDAC5-202ENST00000336057 ZNF287Q9HBT7 754 aa18.22■□□□□ 0.51
HDAC5-202ENST00000336057 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
HDAC5-202ENST00000336057 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
HDAC5-202ENST00000336057 IL15P40933 162 aaPredicted RBP18.21■□□□□ 0.51
HDAC5-202ENST00000336057 HOXC9P31274 260 aa18.21■□□□□ 0.51
HDAC5-202ENST00000336057 CCDC186Q7Z3E2 898 aa18.21■□□□□ 0.51
HDAC5-202ENST00000336057 CCDC148Q8NFR7 591 aa18.21■□□□□ 0.51
HDAC5-202ENST00000336057 SBNO2Q9Y2G9 1366 aa18.21■□□□□ 0.51
HDAC5-202ENST00000336057 MKNK2Q9HBH9 465 aa18.21■□□□□ 0.5
HDAC5-202ENST00000336057 PAXBP1Q9Y5B6 917 aa18.21■□□□□ 0.5
HDAC5-202ENST00000336057 TRPM2O94759 1503 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 USP5P45974 858 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 SYT1P21579 422 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 SYCP1Q15431 976 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 ZFYVE27Q5T4F4 411 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 CATIPQ7Z7H3 387 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 KCNG4Q8TDN1 519 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms