RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 KNDC1Q76NI1 1749 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 KDM6AO15550 1401 aaPredicted RBP10.9□□□□□ -0.66
COPB2-201ENST00000333188 GOLGA6L22H0YM25 854 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 RBM25P49756 843 aaKnown RBP10.9□□□□□ -0.66
COPB2-201ENST00000333188 LDHAL6AQ6ZMR3 332 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 CHST3Q7LGC8 479 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 NECAB1Q8N987 351 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 PLBD2Q8NHP8 589 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.66
COPB2-201ENST00000333188 PTH1RQ03431 593 aa10.9□□□□□ -0.67
COPB2-201ENST00000333188 NMIQ13287 307 aaPredicted RBP10.9□□□□□ -0.67
COPB2-201ENST00000333188 PI16Q6UXB8 463 aa10.9□□□□□ -0.67
COPB2-201ENST00000333188 TOMM22Q9NS69 142 aa10.9□□□□□ -0.67
COPB2-201ENST00000333188 VPS37CA5D8V6 355 aaPredicted RBP10.89□□□□□ -0.67
COPB2-201ENST00000333188 TOM1O60784 492 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 PRPF40AO75400 957 aaKnown RBP10.89□□□□□ -0.67
COPB2-201ENST00000333188 HAND2P61296 217 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
COPB2-201ENST00000333188 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 ATG3Q9NT62 314 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 JAG2Q9Y219 1238 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
COPB2-201ENST00000333188 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 GBP4Q96PP9 640 aa10.89□□□□□ -0.67
COPB2-201ENST00000333188 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
COPB2-201ENST00000333188 TAF5LO75529 589 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 FERMT3Q86UX7 667 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 UTRNP46939 3433 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
COPB2-201ENST00000333188 ZKSCAN1P17029 563 aaPredicted RBP10.88□□□□□ -0.67
COPB2-201ENST00000333188 IFIT5Q13325 482 aaKnown RBP10.88□□□□□ -0.67
COPB2-201ENST00000333188 PTF1AQ7RTS3 328 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 CCDC83Q8IWF9 413 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 TMX3Q96JJ7 454 aa10.88□□□□□ -0.67
COPB2-201ENST00000333188 DBNLQ9UJU6 430 aaKnown RBP10.88□□□□□ -0.67
COPB2-201ENST00000333188 FMN2Q9NZ56 1722 aa10.87□□□□□ -0.67
COPB2-201ENST00000333188 SLC4A8Q2Y0W8 1093 aa10.87□□□□□ -0.67
COPB2-201ENST00000333188 PI4K2BQ8TCG2 481 aa10.87□□□□□ -0.67
COPB2-201ENST00000333188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.674e-7■■■□□ 14.7
COPB2-201ENST00000333188 A0A0D9SFI3 127 aa10.87□□□□□ -0.67
COPB2-201ENST00000333188 IFIT1P09914 478 aaKnown RBP10.87□□□□□ -0.67
COPB2-201ENST00000333188 TTC39AQ5SRH9 613 aa10.87□□□□□ -0.67
COPB2-201ENST00000333188 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
COPB2-201ENST00000333188 ERVV-2B6SEH9 535 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
COPB2-201ENST00000333188 POLA2Q14181 598 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 ADAMTSL3P82987 1691 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 ADORA1P30542 326 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 ADCK5Q3MIX3 580 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 TNNI3KQ59H18 835 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 ANTXR1Q9H6X2 564 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67
COPB2-201ENST00000333188 FPGT-TNNI3KV9GXZ4 949 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 NFAT5O94916 1531 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 MPHOSPH8Q99549 860 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 RGPD2P0DJD1 1756 aa10.86□□□□□ -0.67
COPB2-201ENST00000333188 IRS4O14654 1257 aaPredicted RBP10.85□□□□□ -0.67
COPB2-201ENST00000333188 CAVIN1Q6NZI2 390 aaKnown RBP10.85□□□□□ -0.67
COPB2-201ENST00000333188 MPNDQ8N594 471 aa10.85□□□□□ -0.67
COPB2-201ENST00000333188 RBM8AQ9Y5S9 174 aaKnown RBP10.85□□□□□ -0.67
COPB2-201ENST00000333188 A0A1B0GUL7 405 aa10.85□□□□□ -0.67
COPB2-201ENST00000333188 CEBPZQ03701 1054 aaKnown RBP10.85□□□□□ -0.67
COPB2-201ENST00000333188 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
COPB2-201ENST00000333188 GREM2Q9H772 168 aa10.85□□□□□ -0.67
COPB2-201ENST00000333188 WWC3Q9ULE0 1092 aa10.85□□□□□ -0.67
COPB2-201ENST00000333188 NWD1Q149M9 1564 aa10.85□□□□□ -0.67
COPB2-201ENST00000333188 ITGA6P23229 1130 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
COPB2-201ENST00000333188 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 ABCF2Q9UG63 623 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 TAF6LQ9Y6J9 622 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 SGSM2O43147 1006 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 PDRG1Q9NUG6 133 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 LTN1O94822 1766 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 CAMTA1Q9Y6Y1 1673 aa10.84□□□□□ -0.67
COPB2-201ENST00000333188 FIBPO43427 364 aa10.83□□□□□ -0.67
COPB2-201ENST00000333188 TCIRG1Q13488 830 aa10.83□□□□□ -0.67
COPB2-201ENST00000333188 CCDC158Q5M9N0 1113 aa10.83□□□□□ -0.67
COPB2-201ENST00000333188 RNF214Q8ND24 703 aa10.83□□□□□ -0.67
COPB2-201ENST00000333188 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.67
COPB2-201ENST00000333188 RBM27Q9P2N5 1060 aaKnown RBP10.83□□□□□ -0.67
COPB2-201ENST00000333188 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.67
COPB2-201ENST00000333188 TOPAZ1Q8N9V7 1692 aa10.83□□□□□ -0.68
COPB2-201ENST00000333188 AK2P54819 239 aa10.83□□□□□ -0.68
COPB2-201ENST00000333188 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
COPB2-201ENST00000333188 FAM173BQ6P4H8 233 aa10.83□□□□□ -0.68
COPB2-201ENST00000333188 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
COPB2-201ENST00000333188 SNX14Q9Y5W7 946 aa10.83□□□□□ -0.68
COPB2-201ENST00000333188 LOC102724428A0A0B4J2F2 783 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 SIK1P57059 783 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 CCT2P78371 535 aaKnown RBP10.82□□□□□ -0.68
COPB2-201ENST00000333188 RRP12Q5JTH9 1297 aaKnown RBP10.82□□□□□ -0.68
COPB2-201ENST00000333188 MARCH10Q8NA82 808 aaPredicted RBP10.82□□□□□ -0.68
COPB2-201ENST00000333188 CYP46A1Q9Y6A2 500 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms