RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RIC1Q4ADV7 1423 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 GRM8O00222 908 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 PCCAP05165 728 aaPredicted RBP11.88□□□□□ -0.51
C11orf54-201ENST00000331239 EZH2Q15910 746 aaKnown RBP11.88□□□□□ -0.51
C11orf54-201ENST00000331239 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 MYD88Q99836 296 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 NYXQ9GZU5 481 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
C11orf54-201ENST00000331239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.87□□□□□ -0.51
C11orf54-201ENST00000331239 GNAI2P04899 355 aa11.87□□□□□ -0.51
C11orf54-201ENST00000331239 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
C11orf54-201ENST00000331239 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-201ENST00000331239 CENPQQ7L2Z9 268 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-201ENST00000331239 ZBTB38Q8NAP3 1195 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-201ENST00000331239 C9orf78Q9NZ63 289 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-201ENST00000331239 TFCP2L1Q9NZI6 479 aa11.87□□□□□ -0.51
C11orf54-201ENST00000331239 UBTFL1P0CB47 393 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-201ENST00000331239 MTX1Q13505 466 aa11.86□□□□□ -0.51
C11orf54-201ENST00000331239 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
C11orf54-201ENST00000331239 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
C11orf54-201ENST00000331239 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
C11orf54-201ENST00000331239 LAMB2P55268 1798 aa11.86□□□□□ -0.51
C11orf54-201ENST00000331239 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-201ENST00000331239 HDAC1Q13547 482 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-201ENST00000331239 SLC10A5Q5PT55 438 aa11.85□□□□□ -0.51
C11orf54-201ENST00000331239 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
C11orf54-201ENST00000331239 HMMRO75330 724 aa11.85□□□□□ -0.51
C11orf54-201ENST00000331239 HLFQ16534 295 aa11.85□□□□□ -0.51
C11orf54-201ENST00000331239 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
C11orf54-201ENST00000331239 UTP14AQ9BVJ6 771 aaKnown RBP11.85□□□□□ -0.51
C11orf54-201ENST00000331239 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 CASP7P55210 303 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 SETDB2Q96T68 719 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 RWDD1Q9H446 243 aaPredicted RBP11.84□□□□□ -0.51
C11orf54-201ENST00000331239 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
C11orf54-201ENST00000331239 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 TM4SF1P30408 202 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 KCNQ4P56696 695 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 ANKRD44Q8N8A2 993 aa11.84□□□□□ -0.51
C11orf54-201ENST00000331239 PNPLA7Q6ZV29 1317 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 GYS1P13807 737 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
C11orf54-201ENST00000331239 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 MYH3P11055 1940 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 RTL9Q8NET4 1388 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
C11orf54-201ENST00000331239 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 MEIS3Q99687 375 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
C11orf54-201ENST00000331239 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
C11orf54-201ENST00000331239 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
C11orf54-201ENST00000331239 COL23A1Q86Y22 540 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-201ENST00000331239 DEFB132Q7Z7B7 95 aa11.82□□□□□ -0.52
C11orf54-201ENST00000331239 ARXQ96QS3 562 aa11.82□□□□□ -0.52
C11orf54-201ENST00000331239 NTSR2O95665 410 aa11.81□□□□□ -0.52
C11orf54-201ENST00000331239 NBR1Q14596 966 aa11.81□□□□□ -0.52
C11orf54-201ENST00000331239 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
C11orf54-201ENST00000331239 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
C11orf54-201ENST00000331239 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
C11orf54-201ENST00000331239 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
C11orf54-201ENST00000331239 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
C11orf54-201ENST00000331239 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 EP400Q96L91 3159 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 PDE8AO60658 829 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 CSF1RP07333 972 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 NBPF7P0C2Y1 421 aaPredicted RBP11.8□□□□□ -0.52
C11orf54-201ENST00000331239 POLA2Q14181 598 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 TBC1D9BQ66K14 1250 aa11.8□□□□□ -0.52
C11orf54-201ENST00000331239 PHF14O94880 888 aa11.79□□□□□ -0.52
C11orf54-201ENST00000331239 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
C11orf54-201ENST00000331239 AMIGO3Q86WK7 504 aa11.79□□□□□ -0.52
C11orf54-201ENST00000331239 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
C11orf54-201ENST00000331239 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
C11orf54-201ENST00000331239 LRRFIP2Q9Y608 721 aaKnown RBP11.79□□□□□ -0.52
C11orf54-201ENST00000331239 DDX60Q8IY21 1712 aaKnown RBP11.79□□□□□ -0.52
C11orf54-201ENST00000331239 NFIXQ14938 502 aa11.79□□□□□ -0.52
C11orf54-201ENST00000331239 SF3B3Q15393 1217 aaKnown RBP11.79□□□□□ -0.52
C11orf54-201ENST00000331239 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
C11orf54-201ENST00000331239 IRS4O14654 1257 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-201ENST00000331239 FOXO4P98177 505 aa11.78□□□□□ -0.52
C11orf54-201ENST00000331239 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-201ENST00000331239 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
C11orf54-201ENST00000331239 DCTPP1Q9H773 170 aa11.78□□□□□ -0.52
C11orf54-201ENST00000331239 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
C11orf54-201ENST00000331239 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
C11orf54-201ENST00000331239 ST5P78524 1137 aa11.78□□□□□ -0.52
C11orf54-201ENST00000331239 GPTP24298 496 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
C11orf54-201ENST00000331239 SMC5Q8IY18 1101 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
C11orf54-201ENST00000331239 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms