RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 MEGF6O75095 1541 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 UBE2HP62256 183 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 FAM184AQ8NB25 1140 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 KCNB2Q92953 911 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
BRCC3-201ENST00000330045 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
BRCC3-201ENST00000330045 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
BRCC3-201ENST00000330045 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
BRCC3-201ENST00000330045 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
BRCC3-201ENST00000330045 SH2B1Q9NRF2 756 aaPredicted RBP18.41■□□□□ 0.54
BRCC3-201ENST00000330045 GRM8O00222 908 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 GJB2P29033 226 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 NECTIN1Q15223 517 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 UVSSAQ2YD98 709 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 PTMAP06454 111 aaKnown RBP18.4■□□□□ 0.54
BRCC3-201ENST00000330045 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
BRCC3-201ENST00000330045 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 PRDM11Q9NQV5 511 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 R3HCC1Q9Y3T6 440 aaKnown RBP18.4■□□□□ 0.54
BRCC3-201ENST00000330045 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
BRCC3-201ENST00000330045 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
BRCC3-201ENST00000330045 G3BP1Q13283 466 aaKnown RBP eCLIP18.39■□□□□ 0.53
BRCC3-201ENST00000330045 CSPP1Q1MSJ5 1256 aa18.39■□□□□ 0.53
BRCC3-201ENST00000330045 UTYO14607 1347 aa18.39■□□□□ 0.53
BRCC3-201ENST00000330045 HIP1O00291 1037 aa18.39■□□□□ 0.53
BRCC3-201ENST00000330045 FIBPO43427 364 aa18.39■□□□□ 0.53
BRCC3-201ENST00000330045 SASH1O94885 1247 aa18.39■□□□□ 0.53
BRCC3-201ENST00000330045 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
BRCC3-201ENST00000330045 BICC1Q9H694 974 aaKnown RBP18.39■□□□□ 0.53
BRCC3-201ENST00000330045 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
BRCC3-201ENST00000330045 DDX21Q9NR30 783 aaKnown RBP eCLIP18.38■□□□□ 0.53
BRCC3-201ENST00000330045 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
BRCC3-201ENST00000330045 AIMP1Q12904 312 aaKnown RBP18.38■□□□□ 0.53
BRCC3-201ENST00000330045 RAPGEF4Q8WZA2 1011 aa18.38■□□□□ 0.53
BRCC3-201ENST00000330045 EAF2Q96CJ1 260 aaPredicted RBP18.38■□□□□ 0.53
BRCC3-201ENST00000330045 MTMR6Q9Y217 621 aa18.38■□□□□ 0.53
BRCC3-201ENST00000330045 KCNJ4P48050 445 aa18.37■□□□□ 0.53
BRCC3-201ENST00000330045 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
BRCC3-201ENST00000330045 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
BRCC3-201ENST00000330045 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
BRCC3-201ENST00000330045 CPDO75976 1380 aa18.37■□□□□ 0.53
BRCC3-201ENST00000330045 ME3Q16798 604 aa18.37■□□□□ 0.53
BRCC3-201ENST00000330045 MAP4K1Q92918 833 aa18.37■□□□□ 0.53
BRCC3-201ENST00000330045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.37■□□□□ 0.53
BRCC3-201ENST00000330045 NMIQ13287 307 aaPredicted RBP18.36■□□□□ 0.53
BRCC3-201ENST00000330045 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
BRCC3-201ENST00000330045 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
BRCC3-201ENST00000330045 ST3GAL1Q11201 340 aa18.35■□□□□ 0.53
BRCC3-201ENST00000330045 PDIA6Q15084 440 aa18.35■□□□□ 0.53
BRCC3-201ENST00000330045 DTNBO60941 627 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 CYP27B1O15528 508 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 HCLS1P14317 486 aaPredicted RBP18.34■□□□□ 0.53
BRCC3-201ENST00000330045 TATP17735 454 aaPredicted RBP18.34■□□□□ 0.53
BRCC3-201ENST00000330045 PSMA5P28066 241 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 SLC39A6Q13433 755 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 TLR7Q9NYK1 1049 aaKnown RBP18.34■□□□□ 0.53
BRCC3-201ENST00000330045 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 TPCN1Q9ULQ1 816 aa18.34■□□□□ 0.53
BRCC3-201ENST00000330045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
BRCC3-201ENST00000330045 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
BRCC3-201ENST00000330045 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.53
BRCC3-201ENST00000330045 SLC27A2O14975 620 aa18.33■□□□□ 0.53
BRCC3-201ENST00000330045 IGKV5-2P06315 115 aa18.33■□□□□ 0.53
BRCC3-201ENST00000330045 KLHL34Q8N239 644 aa18.33■□□□□ 0.53
BRCC3-201ENST00000330045 NECAB1Q8N987 351 aa18.33■□□□□ 0.53
BRCC3-201ENST00000330045 SIL1Q9H173 461 aa18.33■□□□□ 0.53
BRCC3-201ENST00000330045 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.53
BRCC3-201ENST00000330045 GLIPR1L2Q4G1C9 344 aa18.33■□□□□ 0.52
BRCC3-201ENST00000330045 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
BRCC3-201ENST00000330045 PHKG2P15735 406 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 FSD1Q9BTV5 496 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 A0A0D9SFI3 127 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 KIAA2012Q0VF49 1180 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 RNF20Q5VTR2 975 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 NHSL1Q5SYE7 1610 aa18.32■□□□□ 0.52
BRCC3-201ENST00000330045 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 ADCY5O95622 1261 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 PDIA4P13667 645 aaKnown RBP18.31■□□□□ 0.52
BRCC3-201ENST00000330045 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 LARP1BQ659C4 914 aaKnown RBP18.31■□□□□ 0.52
BRCC3-201ENST00000330045 MRC1P22897 1456 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 C5P01031 1676 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 GIMAP6Q6P9H5 292 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 FUCA2Q9BTY2 467 aa18.31■□□□□ 0.52
BRCC3-201ENST00000330045 NEURL1BA8MQ27 555 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 BLOC1S2Q6QNY1 142 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 COL5A2P05997 1499 aaPredicted RBP18.3■□□□□ 0.52
BRCC3-201ENST00000330045 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 MYL6BP14649 208 aa18.3■□□□□ 0.52
BRCC3-201ENST00000330045 ANKRD1Q15327 319 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms