RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 KCNG1Q9UIX4 513 aa17.86■□□□□ 0.45
HOXA3-201ENST00000317201 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
HOXA3-201ENST00000317201 ARFGEF2Q9Y6D5 1785 aa17.85■□□□□ 0.45
HOXA3-201ENST00000317201 BMP2KLQ5H9B9 411 aa17.85■□□□□ 0.45
HOXA3-201ENST00000317201 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
HOXA3-201ENST00000317201 COL15A1P39059 1388 aa17.84■□□□□ 0.45
HOXA3-201ENST00000317201 NBPF7P0C2Y1 421 aaPredicted RBP17.84■□□□□ 0.45
HOXA3-201ENST00000317201 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
HOXA3-201ENST00000317201 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
HOXA3-201ENST00000317201 NBPF14Q5TI25 921 aa17.84■□□□□ 0.45
HOXA3-201ENST00000317201 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
HOXA3-201ENST00000317201 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
HOXA3-201ENST00000317201 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.45
HOXA3-201ENST00000317201 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.45
HOXA3-201ENST00000317201 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.45
HOXA3-201ENST00000317201 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.44
HOXA3-201ENST00000317201 GRM8O00222 908 aa17.83■□□□□ 0.44
HOXA3-201ENST00000317201 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
HOXA3-201ENST00000317201 ASAP1Q9ULH1 1129 aa17.83■□□□□ 0.44
HOXA3-201ENST00000317201 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
HOXA3-201ENST00000317201 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
HOXA3-201ENST00000317201 IGKV5-2P06315 115 aa17.82■□□□□ 0.44
HOXA3-201ENST00000317201 PPP1R9BQ96SB3 815 aa17.82■□□□□ 0.44
HOXA3-201ENST00000317201 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
HOXA3-201ENST00000317201 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
HOXA3-201ENST00000317201 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
HOXA3-201ENST00000317201 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
HOXA3-201ENST00000317201 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.81■□□□□ 0.44
HOXA3-201ENST00000317201 STARD3NLO95772 234 aa17.81■□□□□ 0.44
HOXA3-201ENST00000317201 C8orf37Q96NL8 207 aa17.81■□□□□ 0.44
HOXA3-201ENST00000317201 GCKRQ14397 625 aa17.8■□□□□ 0.44
HOXA3-201ENST00000317201 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
HOXA3-201ENST00000317201 PPP1R42Q7Z4L9 355 aa17.8■□□□□ 0.44
HOXA3-201ENST00000317201 PLEKHM2Q8IWE5 1019 aa17.8■□□□□ 0.44
HOXA3-201ENST00000317201 CHMP5Q9NZZ3 219 aa17.8■□□□□ 0.44
HOXA3-201ENST00000317201 HSP90AB4PQ58FF6 505 aa17.8■□□□□ 0.44
HOXA3-201ENST00000317201 MARCH10Q8NA82 808 aaPredicted RBP17.8■□□□□ 0.44
HOXA3-201ENST00000317201 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
HOXA3-201ENST00000317201 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
HOXA3-201ENST00000317201 OSBPL3Q9H4L5 887 aa17.79■□□□□ 0.44
HOXA3-201ENST00000317201 ISY1Q9ULR0 285 aaKnown RBP17.79■□□□□ 0.44
HOXA3-201ENST00000317201 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
HOXA3-201ENST00000317201 TAF3Q5VWG9 929 aa17.79■□□□□ 0.44
HOXA3-201ENST00000317201 MYD88Q99836 296 aa17.79■□□□□ 0.44
HOXA3-201ENST00000317201 DDX11L8A8MPP1 907 aa17.79■□□□□ 0.44
HOXA3-201ENST00000317201 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
HOXA3-201ENST00000317201 TJP1Q07157 1748 aa17.78■□□□□ 0.44
HOXA3-201ENST00000317201 A1BGP04217 495 aa17.78■□□□□ 0.44
HOXA3-201ENST00000317201 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
HOXA3-201ENST00000317201 AFDNP55196 1824 aaKnown RBP17.78■□□□□ 0.44
HOXA3-201ENST00000317201 ZNF831Q5JPB2 1677 aa17.78■□□□□ 0.44
HOXA3-201ENST00000317201 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
HOXA3-201ENST00000317201 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
HOXA3-201ENST00000317201 DNAJC10Q8IXB1 793 aa17.77■□□□□ 0.43
HOXA3-201ENST00000317201 USP21Q9UK80 565 aa17.76■□□□□ 0.43
HOXA3-201ENST00000317201 EXOC6BQ9Y2D4 811 aa17.76■□□□□ 0.43
HOXA3-201ENST00000317201 ZNF500O60304 480 aaPredicted RBP17.76■□□□□ 0.43
HOXA3-201ENST00000317201 TTC22Q5TAA0 569 aa17.76■□□□□ 0.43
HOXA3-201ENST00000317201 TRERF1Q96PN7 1200 aa17.76■□□□□ 0.43
HOXA3-201ENST00000317201 NOL7Q9UMY1 257 aaKnown RBP17.76■□□□□ 0.43
HOXA3-201ENST00000317201 SALL3Q9BXA9 1300 aa17.76■□□□□ 0.43
HOXA3-201ENST00000317201 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
HOXA3-201ENST00000317201 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
HOXA3-201ENST00000317201 UPF2Q9HAU5 1272 aaKnown RBP17.75■□□□□ 0.43
HOXA3-201ENST00000317201 CYP19A1P11511 503 aaPredicted RBP17.75■□□□□ 0.43
HOXA3-201ENST00000317201 KAZALD1Q96I82 304 aa17.75■□□□□ 0.43
HOXA3-201ENST00000317201 SUCLG2Q96I99 432 aa17.75■□□□□ 0.43
HOXA3-201ENST00000317201 AOX1Q06278 1338 aa17.75■□□□□ 0.43
HOXA3-201ENST00000317201 RREB1Q92766 1687 aa17.75■□□□□ 0.43
HOXA3-201ENST00000317201 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 HSPA1LP34931 641 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
HOXA3-201ENST00000317201 KIF1BPQ96EK5 621 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
HOXA3-201ENST00000317201 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
HOXA3-201ENST00000317201 FAM98CQ17RN3 349 aaKnown RBP17.74■□□□□ 0.43
HOXA3-201ENST00000317201 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
HOXA3-201ENST00000317201 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-201ENST00000317201 SURF6O75683 361 aaKnown RBP17.73■□□□□ 0.43
HOXA3-201ENST00000317201 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
HOXA3-201ENST00000317201 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-201ENST00000317201 STAP2Q9UGK3 403 aa17.73■□□□□ 0.43
HOXA3-201ENST00000317201 CASP7P55210 303 aa17.73■□□□□ 0.43
HOXA3-201ENST00000317201 RABL6Q3YEC7 729 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-201ENST00000317201 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
HOXA3-201ENST00000317201 H7C1W4 665 aa17.72■□□□□ 0.43
HOXA3-201ENST00000317201 U2AF2P26368 475 aaKnown RBP eCLIP17.72■□□□□ 0.43
HOXA3-201ENST00000317201 BICC1Q9H694 974 aaKnown RBP17.72■□□□□ 0.43
HOXA3-201ENST00000317201 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
HOXA3-201ENST00000317201 GSPT1P15170 499 aaKnown RBP17.72■□□□□ 0.43
HOXA3-201ENST00000317201 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
HOXA3-201ENST00000317201 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.43
HOXA3-201ENST00000317201 PDE1AP54750 535 aa17.71■□□□□ 0.43
HOXA3-201ENST00000317201 CSPP1Q1MSJ5 1256 aa17.71■□□□□ 0.43
HOXA3-201ENST00000317201 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
HOXA3-201ENST00000317201 DNAJC2Q99543 621 aaKnown RBP17.71■□□□□ 0.43
HOXA3-201ENST00000317201 ISCA1Q9BUE6 129 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms