RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 NBPF14Q5TI25 921 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 NBPF10Q6P3W6 841 aaKnown RBP18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 RASEFQ8IZ41 740 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 NBPF15Q8N660 670 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 COPRSQ9NQ92 184 aa18.88■□□□□ 0.61
TSC22D3-201ENST00000315660 IL2RBP14784 551 aa18.87■□□□□ 0.61
TSC22D3-201ENST00000315660 RFX5P48382 616 aaPredicted RBP18.87■□□□□ 0.61
TSC22D3-201ENST00000315660 RABL6Q3YEC7 729 aaPredicted RBP18.87■□□□□ 0.61
TSC22D3-201ENST00000315660 A0A087WZG4 1122 aa18.86■□□□□ 0.61
TSC22D3-201ENST00000315660 NAP1L5Q96NT1 182 aaPredicted RBP18.86■□□□□ 0.61
TSC22D3-201ENST00000315660 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
TSC22D3-201ENST00000315660 ABCA3Q99758 1704 aa18.86■□□□□ 0.61
TSC22D3-201ENST00000315660 PTH1RQ03431 593 aa18.85■□□□□ 0.61
TSC22D3-201ENST00000315660 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
TSC22D3-201ENST00000315660 TTC14Q96N46 770 aa18.85■□□□□ 0.61
TSC22D3-201ENST00000315660 LMBRD1Q9NUN5 540 aa18.85■□□□□ 0.61
TSC22D3-201ENST00000315660 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
TSC22D3-201ENST00000315660 CASP7P55210 303 aa18.85■□□□□ 0.61
TSC22D3-201ENST00000315660 UBR2Q8IWV8 1755 aa18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 ESPNB1AK53 854 aa18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 BRD1O95696 1058 aa18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 TRIM44Q96DX7 344 aaPredicted RBP18.84■□□□□ 0.61
TSC22D3-201ENST00000315660 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.6
TSC22D3-201ENST00000315660 PAPPAQ13219 1627 aa18.83■□□□□ 0.6
TSC22D3-201ENST00000315660 KDM4FA0A1W2PPD8 638 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 KCNB2Q92953 911 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 FAM227BQ96M60 508 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 CCDC171Q6TFL3 1326 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 A1BGP04217 495 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 AK2P54819 239 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 EVA1CP58658 441 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 SHANK3Q9BYB0 1731 aa18.82■□□□□ 0.6
TSC22D3-201ENST00000315660 H7C1W4 665 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 ZKSCAN1P17029 563 aaPredicted RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 TFCP2Q12800 502 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 TNNI3KQ59H18 835 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 FOXD4L5Q5VV16 416 aaPredicted RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 FOXD4L4Q8WXT5 416 aaPredicted RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 SNRKQ9NRH2 765 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 FPGT-TNNI3KV9GXZ4 949 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 PRPF40AO75400 957 aaKnown RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 TNS2Q63HR2 1409 aa18.81■□□□□ 0.6
TSC22D3-201ENST00000315660 NECTIN1Q15223 517 aa18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 LMBR1LQ6UX01 489 aa18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 DBNLQ9UJU6 430 aaKnown RBP18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 KCNJ4P48050 445 aa18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 RUFY3Q7L099 469 aa18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 CHAMP1Q96JM3 812 aa18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 CWC25Q9NXE8 425 aaPredicted RBP18.8■□□□□ 0.6
TSC22D3-201ENST00000315660 ATP5JP18859 108 aa18.79■□□□□ 0.6
TSC22D3-201ENST00000315660 FOXO4P98177 505 aa18.79■□□□□ 0.6
TSC22D3-201ENST00000315660 TM6SF1Q9BZW5 370 aa18.79■□□□□ 0.6
TSC22D3-201ENST00000315660 RBM8AQ9Y5S9 174 aaKnown RBP18.79■□□□□ 0.6
TSC22D3-201ENST00000315660 NUP188Q5SRE5 1749 aa18.79■□□□□ 0.6
TSC22D3-201ENST00000315660 A0A0D9SFI3 127 aa18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 CPA1P15085 419 aa18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 ADCK5Q3MIX3 580 aa18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 MAP4K1Q92918 833 aa18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 WDR33Q9C0J8 1336 aaKnown RBP18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 CYP46A1Q9Y6A2 500 aa18.78■□□□□ 0.6
TSC22D3-201ENST00000315660 VPS53Q5VIR6 699 aa18.77■□□□□ 0.6
TSC22D3-201ENST00000315660 CAVIN1Q6NZI2 390 aaKnown RBP18.77■□□□□ 0.6
TSC22D3-201ENST00000315660 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
TSC22D3-201ENST00000315660 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
TSC22D3-201ENST00000315660 MED23Q9ULK4 1368 aa18.77■□□□□ 0.59
TSC22D3-201ENST00000315660 CREB3L3Q68CJ9 461 aa18.77■□□□□ 0.59
TSC22D3-201ENST00000315660 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.59
TSC22D3-201ENST00000315660 PDRG1Q9NUG6 133 aa18.77■□□□□ 0.59
TSC22D3-201ENST00000315660 RNF20Q5VTR2 975 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 CCDC191Q8NCU4 936 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 GPT2Q8TD30 523 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 EDC3Q96F86 508 aaKnown RBP18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 TMOD3Q9NYL9 352 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 PSMA5P28066 241 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 CCDC173Q0VFZ6 552 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 DBNDD2Q9BQY9 259 aa18.76■□□□□ 0.59
TSC22D3-201ENST00000315660 TOGARAM1Q9Y4F4 1720 aa18.75■□□□□ 0.59
TSC22D3-201ENST00000315660 TJP1Q07157 1748 aa18.75■□□□□ 0.59
TSC22D3-201ENST00000315660 MBD3O95983 291 aa18.75■□□□□ 0.59
TSC22D3-201ENST00000315660 ZNF445P59923 1031 aa18.75■□□□□ 0.59
TSC22D3-201ENST00000315660 ZSCAN31Q96LW9 406 aaPredicted RBP18.75■□□□□ 0.59
TSC22D3-201ENST00000315660 RPAP1Q9BWH6 1393 aaPredicted RBP18.74■□□□□ 0.59
TSC22D3-201ENST00000315660 SLC27A2O14975 620 aa18.74■□□□□ 0.59
TSC22D3-201ENST00000315660 NASPP49321 788 aaPredicted RBP18.74■□□□□ 0.59
TSC22D3-201ENST00000315660 ZSCAN23Q3MJ62 389 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms