RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 DDB1Q16531 1140 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 PPP1R42Q7Z4L9 355 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 RBSNQ9H1K0 784 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 IGKV5-2P06315 115 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 SHANK3Q9BYB0 1731 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 COL22A1Q8NFW1 1626 aaPredicted RBP12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 HMMRO75330 724 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 REC8O95072 547 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 TTLL7Q6ZT98 887 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 CERKQ8TCT0 537 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 SDSP20132 328 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 DNAJC10Q8IXB1 793 aa12.46□□□□□ -0.41
APOBEC3F-201ENST00000308521 DISP2A7MBM2 1401 aa12.46□□□□□ -0.42
APOBEC3F-201ENST00000308521 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 ZDHHC9Q9Y397 364 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 ZBTB3Q9H5J0 574 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 CCDC94Q9BW85 323 aaPredicted RBP12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
APOBEC3F-201ENST00000308521 SPATA31A5Q5VU36 1347 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 SPATA31A7Q8IWB4 1347 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 EP400Q96L91 3159 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 PKP1Q13835 747 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 SLC4A9Q96Q91 983 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 ERC2O15083 957 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 MBD3O95983 291 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 HSPA1LP34931 641 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 FAM182BQ5T319 152 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 ZKSCAN5Q9Y2L8 839 aa12.44□□□□□ -0.42
APOBEC3F-201ENST00000308521 TOGARAM1Q9Y4F4 1720 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 GRM8O00222 908 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 MCM2P49736 904 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 METTL22Q9BUU2 404 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 PA2G4Q9UQ80 394 aaKnown RBP12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 KCNQ2O43526 872 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 KAZALD1Q96I82 304 aa12.43□□□□□ -0.42
APOBEC3F-201ENST00000308521 ALDH1L1O75891 902 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 JCADQ9P266 1359 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 KCPQ6ZWJ8 1503 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 GCKRQ14397 625 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 SSH3Q8TE77 659 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
APOBEC3F-201ENST00000308521 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 ZSCAN20P17040 1043 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 UBE3BQ7Z3V4 1068 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 USP21Q9UK80 565 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 SLIT2O94813 1529 aa12.41□□□□□ -0.42
APOBEC3F-201ENST00000308521 CUL4AQ13619 759 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 THRAP3Q9Y2W1 955 aaKnown RBP12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 GLI3P10071 1580 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 BCL9O00512 1426 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 BRD1O95696 1058 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 KCNQ4P56696 695 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 MEX3CQ5U5Q3 659 aaKnown RBP12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 PTF1AQ7RTS3 328 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
APOBEC3F-201ENST00000308521 BCL9LQ86UU0 1499 aa12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 A0A087WZG4 1122 aa12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 POLA2Q14181 598 aa12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 IL17RAQ96F46 866 aa12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 INTS4Q96HW7 963 aaKnown RBP12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 SIL1Q9H173 461 aa12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 OS9Q13438 667 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
APOBEC3F-201ENST00000308521 ITGB4P16144 1822 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 ANAPC15P60006 121 aa12.38□□□□□ -0.43
APOBEC3F-201ENST00000308521 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms