RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 CEP126Q9P2H0 1117 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
DDB1-201ENST00000301764 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
DDB1-201ENST00000301764 LIG1P18858 919 aa17.69■□□□□ 0.42
DDB1-201ENST00000301764 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
DDB1-201ENST00000301764 SMARCC1Q92922 1105 aaPredicted RBP17.69■□□□□ 0.42
DDB1-201ENST00000301764 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
DDB1-201ENST00000301764 PA2G4Q9UQ80 394 aaKnown RBP17.69■□□□□ 0.42
DDB1-201ENST00000301764 LARP1Q6PKG0 1096 aaKnown RBP17.69■□□□□ 0.42
DDB1-201ENST00000301764 KIAA1328Q86T90 577 aa17.69■□□□□ 0.42
DDB1-201ENST00000301764 FBXO31Q5XUX0 539 aaPredicted RBP17.68■□□□□ 0.42
DDB1-201ENST00000301764 CCDC148Q8NFR7 591 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 FOXO3O43524 673 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 TXLNAP40222 546 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 NMIQ13287 307 aaPredicted RBP17.68■□□□□ 0.42
DDB1-201ENST00000301764 Q6ZUG5 572 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 RSPH14Q9UHP6 348 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
DDB1-201ENST00000301764 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 GOLGA6L9A6NEM1 432 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 MAP3K2Q9Y2U5 619 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 CAPN2P17655 700 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 HAND2P61296 217 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 RUFY3Q7L099 469 aa17.68■□□□□ 0.42
DDB1-201ENST00000301764 PTPRTO14522 1441 aa17.67■□□□□ 0.42
DDB1-201ENST00000301764 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
DDB1-201ENST00000301764 IPO4Q8TEX9 1081 aaKnown RBP17.67■□□□□ 0.42
DDB1-201ENST00000301764 DBF4Q9UBU7 674 aaPredicted RBP17.67■□□□□ 0.42
DDB1-201ENST00000301764 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.67■□□□□ 0.426e-7■■■■□ 20.4
DDB1-201ENST00000301764 PNMA6EA0A0J9YXQ4 647 aa17.67■□□□□ 0.42
DDB1-201ENST00000301764 PHACTR2O75167 634 aa17.67■□□□□ 0.42
DDB1-201ENST00000301764 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
DDB1-201ENST00000301764 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
DDB1-201ENST00000301764 DENND4BO75064 1496 aaPredicted RBP17.67■□□□□ 0.42
DDB1-201ENST00000301764 ZNF215Q9UL58 517 aaPredicted RBP17.66■□□□□ 0.42
DDB1-201ENST00000301764 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 SGSM2O43147 1006 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.66■□□□□ 0.42
DDB1-201ENST00000301764 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 GOLIM4O00461 696 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 SYKP43405 635 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 MYD88Q99836 296 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
DDB1-201ENST00000301764 EIF5P55010 431 aaKnown RBP17.66■□□□□ 0.42
DDB1-201ENST00000301764 MAP9Q49MG5 647 aa17.66■□□□□ 0.42
DDB1-201ENST00000301764 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
DDB1-201ENST00000301764 SRRTQ9BXP5 876 aaKnown RBP17.66■□□□□ 0.42
DDB1-201ENST00000301764 GOLGA6L10A6NI86 522 aa17.65■□□□□ 0.42
DDB1-201ENST00000301764 MARCKSP29966 332 aaPredicted RBP17.65■□□□□ 0.42
DDB1-201ENST00000301764 GTF2A1P52655 376 aaPredicted RBP17.65■□□□□ 0.42
DDB1-201ENST00000301764 CYB5RLQ6IPT4 315 aa17.65■□□□□ 0.42
DDB1-201ENST00000301764 ABCC4O15439 1325 aa17.65■□□□□ 0.42
DDB1-201ENST00000301764 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
DDB1-201ENST00000301764 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
DDB1-201ENST00000301764 IDH1O75874 414 aaKnown RBP17.64■□□□□ 0.42
DDB1-201ENST00000301764 CCDC102BQ68D86 513 aa17.64■□□□□ 0.42
DDB1-201ENST00000301764 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.42
DDB1-201ENST00000301764 ADGRL1O94910 1474 aa17.64■□□□□ 0.42
DDB1-201ENST00000301764 EVCP57679 992 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 CDC37L1Q7L3B6 337 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 RAD50Q92878 1312 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 UTP14CQ5TAP6 766 aaKnown RBP17.64■□□□□ 0.41
DDB1-201ENST00000301764 HSPA4P34932 840 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 LEO1Q8WVC0 666 aaPredicted RBP17.64■□□□□ 0.41
DDB1-201ENST00000301764 CNNM1Q9NRU3 951 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
DDB1-201ENST00000301764 KARSQ15046 597 aaKnown RBP17.63■□□□□ 0.41
DDB1-201ENST00000301764 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
DDB1-201ENST00000301764 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
DDB1-201ENST00000301764 A0A1B0GVL5 298 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 KRBA2Q6ZNG9 492 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 MBD5Q9P267 1494 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 STIM1Q13586 685 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 VPS18Q9P253 973 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 RTL1A6NKG5 1358 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
DDB1-201ENST00000301764 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
DDB1-201ENST00000301764 IQCEQ6IPM2 695 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 CCDC144CPQ8IYA2 1237 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 RASSF4Q9H2L5 321 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 ESCO1Q5FWF5 840 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 KIAA1524Q8TCG1 905 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 KCNG4Q8TDN1 519 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 ODF2Q5BJF6 829 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 CTR9Q6PD62 1173 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 CHST3Q7LGC8 479 aa17.62■□□□□ 0.41
DDB1-201ENST00000301764 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms