RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 NAPBQ9H115 298 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
GCN1-201ENST00000300648 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
GCN1-201ENST00000300648 CROCCP2Q86T23 111 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 MTIF2P46199 727 aaKnown RBP12.92□□□□□ -0.34
GCN1-201ENST00000300648 TMC6Q7Z403 805 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 CABP2Q9NPB3 220 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 MTMR7Q9Y216 660 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
GCN1-201ENST00000300648 CABP4P57796 275 aa12.92□□□□□ -0.34
GCN1-201ENST00000300648 CTNNBL1Q8WYA6 563 aaPredicted RBP12.92□□□□□ -0.34
GCN1-201ENST00000300648 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 XPCQ01831 940 aaPredicted RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 NAP1L3Q99457 506 aaPredicted RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 CLUL1Q15846 466 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 BCAR3O75815 825 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 KRT86O43790 486 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 GNG11P61952 73 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 NCOA1Q15788 1441 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 SSX2IPQ9Y2D8 614 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 POTEDQ86YR6 584 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 ERMNQ8TAM6 284 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
GCN1-201ENST00000300648 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
GCN1-201ENST00000300648 NUP160Q12769 1436 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
GCN1-201ENST00000300648 SLU7O95391 586 aaKnown RBP12.9□□□□□ -0.34
GCN1-201ENST00000300648 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 NDC80O14777 642 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
GCN1-201ENST00000300648 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
GCN1-201ENST00000300648 ZNF530Q6P9A1 599 aaPredicted RBP12.9□□□□□ -0.34
GCN1-201ENST00000300648 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 IL16Q14005 1332 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 TACC1O75410 805 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 BTBD11A6QL63 1104 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 SETDB1Q15047 1291 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
GCN1-201ENST00000300648 FAM114A2Q9NRY5 505 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 LACTBP83111 547 aaPredicted RBP12.89□□□□□ -0.35
GCN1-201ENST00000300648 C10orf67Q8IYJ2 551 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 ZWINTO95229 277 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
GCN1-201ENST00000300648 OTUD6BQ8N6M0 293 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 TSR2Q969E8 191 aaKnown RBP12.89□□□□□ -0.35
GCN1-201ENST00000300648 SAMD15Q9P1V8 674 aa12.89□□□□□ -0.35
GCN1-201ENST00000300648 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
GCN1-201ENST00000300648 CNGA1P29973 690 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 VAV2P52735 878 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 OGFRQ9NZT2 677 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 HDXQ7Z353 690 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 SIL1Q9H173 461 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 TEX14Q8IWB6 1497 aa12.88□□□□□ -0.35
GCN1-201ENST00000300648 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
GCN1-201ENST00000300648 TERF1P54274 439 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 TBC1D32Q96NH3 1257 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 ZSCAN23Q3MJ62 389 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 CAPN2P17655 700 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 SH2D4BQ5SQS7 431 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 PPP1R2P41236 205 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 SMAP1Q8IYB5 467 aaPredicted RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 ZNF213O14771 459 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 MACROD2A1Z1Q3 448 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 CCDC96Q2M329 555 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms