RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 ME1P48163 572 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 STX1AQ16623 288 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 SIL1Q9H173 461 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 HYPKQ9NX55 129 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 IFNKQ9P0W0 207 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 NSD2O96028 1365 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 ADGRL1O94910 1474 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 H2AFXP16104 143 aaPredicted RBP11.9□□□□□ -0.5
CLDN1-201ENST00000295522 IBSPP21815 317 aaPredicted RBP11.9□□□□□ -0.5
CLDN1-201ENST00000295522 CCZ1BP86790 482 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
CLDN1-201ENST00000295522 SULT6B1Q6IMI4 303 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 PDILTQ8N807 584 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 CCDC102AQ96A19 550 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 PPP6R1Q9UPN7 881 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 JRKLQ9Y4A0 524 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 GUCY1B3Q02153 619 aa11.9□□□□□ -0.51
CLDN1-201ENST00000295522 GOLGA8FQ08AF8 430 aa11.9□□□□□ -0.51
CLDN1-201ENST00000295522 GOLGA8DPQ0D2H9 430 aa11.9□□□□□ -0.51
CLDN1-201ENST00000295522 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.51
CLDN1-201ENST00000295522 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.51
CLDN1-201ENST00000295522 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLDN1-201ENST00000295522 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.51
CLDN1-201ENST00000295522 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.51
CLDN1-201ENST00000295522 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
CLDN1-201ENST00000295522 SGSM2O43147 1006 aa11.89□□□□□ -0.51
CLDN1-201ENST00000295522 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
CLDN1-201ENST00000295522 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
CLDN1-201ENST00000295522 PTH1RQ03431 593 aa11.89□□□□□ -0.51
CLDN1-201ENST00000295522 ZSCAN31Q96LW9 406 aaPredicted RBP11.89□□□□□ -0.51
CLDN1-201ENST00000295522 ORC3Q9UBD5 711 aaPredicted RBP11.89□□□□□ -0.51
CLDN1-201ENST00000295522 TPCN1Q9ULQ1 816 aa11.89□□□□□ -0.51
CLDN1-201ENST00000295522 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 SH2B1Q9NRF2 756 aaPredicted RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 ADAM21Q9UKJ8 722 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 GNG11P61952 73 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 SRLQ86TD4 932 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 TTC14Q96N46 770 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 SLC26A8Q96RN1 970 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 GSDMDP57764 484 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
CLDN1-201ENST00000295522 MYCBPQ99417 103 aaPredicted RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
CLDN1-201ENST00000295522 JAK2O60674 1132 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
CLDN1-201ENST00000295522 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 PGBD1Q96JS3 809 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 XPO4Q9C0E2 1151 aaKnown RBP11.87□□□□□ -0.51
CLDN1-201ENST00000295522 ANO10Q9NW15 660 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 ERBB3P21860 1342 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 GNAI3P08754 354 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 IQGAP3Q86VI3 1631 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 SASH3O75995 380 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 GOLGA5Q8TBA6 731 aa11.87□□□□□ -0.51
CLDN1-201ENST00000295522 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 SERPINC1P01008 464 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 NOP2P46087 812 aaKnown RBP11.86□□□□□ -0.51
CLDN1-201ENST00000295522 HSP90B2PQ58FF3 399 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 CTR9Q6PD62 1173 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 NME9Q86XW9 330 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 BRF1Q92994 677 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 RABEP2Q9H5N1 569 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 UNC13BO14795 1591 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 FAM193AP78312 1265 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 IDI1Q13907 227 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 FOXR1Q6PIV2 292 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 MICALL1Q8N3F8 863 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 FBXO18Q8NFZ0 1043 aa11.86□□□□□ -0.51
CLDN1-201ENST00000295522 LSG1Q9H089 658 aaKnown RBP11.86□□□□□ -0.51
CLDN1-201ENST00000295522 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 ETF1P62495 437 aaKnown RBP11.85□□□□□ -0.51
CLDN1-201ENST00000295522 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
CLDN1-201ENST00000295522 FANCAO15360 1455 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 CLTCL1P53675 1640 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
CLDN1-201ENST00000295522 ACTN2P35609 894 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 IQCB1Q15051 598 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
CLDN1-201ENST00000295522 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms