RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
UBXN1-201ENST00000294119 ZNF790Q6PG37 636 aa21.16■□□□□ 0.98
UBXN1-201ENST00000294119 TPTE2Q6XPS3 522 aa21.14■□□□□ 0.97
UBXN1-201ENST00000294119 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
UBXN1-201ENST00000294119 HABP4Q5JVS0 413 aaKnown RBP21.13■□□□□ 0.97
UBXN1-201ENST00000294119 CTU1Q7Z7A3 348 aaKnown RBP21.13■□□□□ 0.97
UBXN1-201ENST00000294119 ZC3H15Q8WU90 426 aaKnown RBP21.13■□□□□ 0.97
UBXN1-201ENST00000294119 HTTP42858 3142 aa21.12■□□□□ 0.97
UBXN1-201ENST00000294119 HIRAP54198 1017 aaPredicted RBP21.11■□□□□ 0.97
UBXN1-201ENST00000294119 LARGE2Q8N3Y3 721 aa21.11■□□□□ 0.97
UBXN1-201ENST00000294119 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
UBXN1-201ENST00000294119 RNF186Q9NXI6 227 aa21.11■□□□□ 0.97
UBXN1-201ENST00000294119 HPS5Q9UPZ3 1129 aa21.11■□□□□ 0.97
UBXN1-201ENST00000294119 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
UBXN1-201ENST00000294119 HUNKP57058 714 aa21.1■□□□□ 0.97
UBXN1-201ENST00000294119 ZNF652Q9Y2D9 606 aa21.1■□□□□ 0.97
UBXN1-201ENST00000294119 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
UBXN1-201ENST00000294119 AKAP11Q9UKA4 1901 aa21.1■□□□□ 0.97
UBXN1-201ENST00000294119 CDHR2Q9BYE9 1310 aa21.09■□□□□ 0.97
UBXN1-201ENST00000294119 SZT2Q5T011 3432 aa21.09■□□□□ 0.97
UBXN1-201ENST00000294119 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
UBXN1-201ENST00000294119 CDC37L1Q7L3B6 337 aa21.09■□□□□ 0.97
UBXN1-201ENST00000294119 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
UBXN1-201ENST00000294119 SLC51AQ86UW1 340 aa21.09■□□□□ 0.97
UBXN1-201ENST00000294119 NPC1L1Q9UHC9 1359 aa21.09■□□□□ 0.97
UBXN1-201ENST00000294119 CXCL9Q07325 125 aa21.08■□□□□ 0.97
UBXN1-201ENST00000294119 IL17REQ8NFR9 667 aa21.08■□□□□ 0.97
UBXN1-201ENST00000294119 FMNL2Q96PY5 1086 aa21.08■□□□□ 0.97
UBXN1-201ENST00000294119 ZNF408Q9H9D4 720 aa21.08■□□□□ 0.97
UBXN1-201ENST00000294119 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.97
UBXN1-201ENST00000294119 ABCC12Q96J65 1359 aa21.08■□□□□ 0.96
UBXN1-201ENST00000294119 BRCA2P51587 3418 aa21.07■□□□□ 0.96
UBXN1-201ENST00000294119 KIF7Q2M1P5 1343 aa21.07■□□□□ 0.96
UBXN1-201ENST00000294119 RGMBQ6NW40 437 aa21.07■□□□□ 0.96
UBXN1-201ENST00000294119 NIM1KQ8IY84 436 aa21.07■□□□□ 0.96
UBXN1-201ENST00000294119 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-201ENST00000294119 TRPA1O75762 1119 aa21.06■□□□□ 0.96
UBXN1-201ENST00000294119 KIF23Q02241 960 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-201ENST00000294119 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
UBXN1-201ENST00000294119 CENPFP49454 3210 aa21.06■□□□□ 0.96
UBXN1-201ENST00000294119 HMOX1P09601 288 aa21.05■□□□□ 0.96
UBXN1-201ENST00000294119 GMPSP49915 693 aaPredicted RBP21.05■□□□□ 0.96
UBXN1-201ENST00000294119 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
UBXN1-201ENST00000294119 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
UBXN1-201ENST00000294119 TRPM4Q8TD43 1214 aa21.04■□□□□ 0.96
UBXN1-201ENST00000294119 CCDC102AQ96A19 550 aa21.04■□□□□ 0.96
UBXN1-201ENST00000294119 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
UBXN1-201ENST00000294119 FXR1P51114 621 aaKnown RBP eCLIP21.03■□□□□ 0.96
UBXN1-201ENST00000294119 PKN2Q16513 984 aaKnown RBP21.03■□□□□ 0.96
UBXN1-201ENST00000294119 MORC1Q86VD1 984 aa21.03■□□□□ 0.96
UBXN1-201ENST00000294119 CSRNP1Q96S65 589 aa21.03■□□□□ 0.96
UBXN1-201ENST00000294119 ZNRF3Q9ULT6 936 aa21.03■□□□□ 0.96
UBXN1-201ENST00000294119 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
UBXN1-201ENST00000294119 KCNQ3O43525 872 aa21.02■□□□□ 0.96
UBXN1-201ENST00000294119 TEFQ10587 303 aa21.02■□□□□ 0.96
UBXN1-201ENST00000294119 DLK2Q6UY11 383 aa21.02■□□□□ 0.96
UBXN1-201ENST00000294119 AOC3Q16853 763 aa21.01■□□□□ 0.95
UBXN1-201ENST00000294119 CRAMP1Q96RY5 1269 aa21.01■□□□□ 0.95
UBXN1-201ENST00000294119 PANK3Q9H999 370 aa21.01■□□□□ 0.95
UBXN1-201ENST00000294119 NBPF26B4DH59 902 aa21■□□□□ 0.95
UBXN1-201ENST00000294119 SLC10A3P09131 477 aa21■□□□□ 0.95
UBXN1-201ENST00000294119 HLFQ16534 295 aa21■□□□□ 0.95
UBXN1-201ENST00000294119 NBPF10Q6P3W6 841 aaKnown RBP21■□□□□ 0.95
UBXN1-201ENST00000294119 USP48Q86UV5 1035 aa21■□□□□ 0.95
UBXN1-201ENST00000294119 RTFDC1Q9BY42 306 aaPredicted RBP21■□□□□ 0.95
UBXN1-201ENST00000294119 PRAMEF22A3QJZ6 481 aa20.99■□□□□ 0.95
UBXN1-201ENST00000294119 FAM177BA6PVY3 158 aa20.99■□□□□ 0.95
UBXN1-201ENST00000294119 GBA2Q9HCG7 927 aaPredicted RBP20.99■□□□□ 0.95
UBXN1-201ENST00000294119 IBTKQ9P2D0 1353 aaPredicted RBP20.98■□□□□ 0.95
UBXN1-201ENST00000294119 PPEF1O14829 653 aaPredicted RBP20.98■□□□□ 0.95
UBXN1-201ENST00000294119 A0A0C4DFX4 3053 aa20.98■□□□□ 0.95
UBXN1-201ENST00000294119 SHTN1A0MZ66 631 aa20.97■□□□□ 0.95
UBXN1-201ENST00000294119 GNAT3A8MTJ3 354 aa20.97■□□□□ 0.95
UBXN1-201ENST00000294119 ZNF157P51786 506 aaPredicted RBP20.97■□□□□ 0.95
UBXN1-201ENST00000294119 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
UBXN1-201ENST00000294119 NYXQ9GZU5 481 aa20.97■□□□□ 0.95
UBXN1-201ENST00000294119 POLR2AP24928 1970 aaKnown RBP20.96■□□□□ 0.95
UBXN1-201ENST00000294119 REM2Q8IYK8 340 aaPredicted RBP20.96■□□□□ 0.95
UBXN1-201ENST00000294119 RPGRQ92834 1020 aaKnown RBP20.96■□□□□ 0.95
UBXN1-201ENST00000294119 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
UBXN1-201ENST00000294119 C2orf69Q8N8R5 385 aa20.95■□□□□ 0.94
UBXN1-201ENST00000294119 CNOT7Q9UIV1 285 aaKnown RBP20.95■□□□□ 0.94
UBXN1-201ENST00000294119 ATP6V0A2Q9Y487 856 aa20.95■□□□□ 0.94
UBXN1-201ENST00000294119 NUP98P52948 1817 aa20.94■□□□□ 0.94
UBXN1-201ENST00000294119 BTBD11A6QL63 1104 aa20.93■□□□□ 0.94
UBXN1-201ENST00000294119 KIAA2012Q0VF49 1180 aa20.93■□□□□ 0.94
UBXN1-201ENST00000294119 NOM1Q5C9Z4 860 aaKnown RBP20.93■□□□□ 0.94
UBXN1-201ENST00000294119 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
UBXN1-201ENST00000294119 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
UBXN1-201ENST00000294119 YDJCA8MPS7 323 aa20.92■□□□□ 0.94
UBXN1-201ENST00000294119 SNRPA1P09661 255 aaKnown RBP20.92■□□□□ 0.94
UBXN1-201ENST00000294119 TNIP1Q15025 636 aa20.92■□□□□ 0.94
UBXN1-201ENST00000294119 FBXO46Q6PJ61 603 aaPredicted RBP20.92■□□□□ 0.94
UBXN1-201ENST00000294119 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
UBXN1-201ENST00000294119 KRT26Q7Z3Y9 468 aa20.92■□□□□ 0.94
UBXN1-201ENST00000294119 SUPT20HQ8NEM7 779 aa20.92■□□□□ 0.94
UBXN1-201ENST00000294119 ZNF296Q8WUU4 475 aaPredicted RBP20.92■□□□□ 0.94
UBXN1-201ENST00000294119 BCL2L13Q9BXK5 485 aa20.92■□□□□ 0.94
UBXN1-201ENST00000294119 RAD17O75943 681 aa20.91■□□□□ 0.94
UBXN1-201ENST00000294119 UBN2Q6ZU65 1347 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms