RNA–Protein interactions for RNA: ENST00000288616.7

CABP1-201, Transcript of calcium binding protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CABP1, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CABP1-201ENST00000288616 GJA3Q9Y6H8 435 aa23.35■■□□□ 1.33
CABP1-201ENST00000288616 UBN2Q6ZU65 1347 aa23.34■■□□□ 1.33
CABP1-201ENST00000288616 MAP1SQ66K74 1059 aaPredicted RBP23.34■■□□□ 1.33
CABP1-201ENST00000288616 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
CABP1-201ENST00000288616 PSMD1Q99460 953 aa23.34■■□□□ 1.33
CABP1-201ENST00000288616 MAPK8IP3Q9UPT6 1336 aa23.32■■□□□ 1.32
CABP1-201ENST00000288616 FOXN1O15353 648 aa23.32■■□□□ 1.32
CABP1-201ENST00000288616 VEGFBP49765 207 aa23.32■■□□□ 1.32
CABP1-201ENST00000288616 EIF6P56537 245 aaKnown RBP23.32■■□□□ 1.32
CABP1-201ENST00000288616 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
CABP1-201ENST00000288616 GPC2Q8N158 579 aa23.32■■□□□ 1.32
CABP1-201ENST00000288616 PNMA8AQ86V59 439 aaPredicted RBP23.31■■□□□ 1.32
CABP1-201ENST00000288616 EIF2S2P20042 333 aaKnown RBP23.3■■□□□ 1.32
CABP1-201ENST00000288616 CC2D2BQ6DHV5 1058 aa23.3■■□□□ 1.32
CABP1-201ENST00000288616 ZNF34Q8IZ26 560 aa23.3■■□□□ 1.32
CABP1-201ENST00000288616 LARGE2Q8N3Y3 721 aa23.3■■□□□ 1.32
CABP1-201ENST00000288616 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
CABP1-201ENST00000288616 SNED1Q8TER0 1413 aa23.3■■□□□ 1.32
CABP1-201ENST00000288616 HOXA10P31260 410 aaPredicted RBP23.29■■□□□ 1.32
CABP1-201ENST00000288616 GIGYF2Q6Y7W6 1299 aaKnown RBP23.29■■□□□ 1.32
CABP1-201ENST00000288616 C3orf67Q6ZVT6 689 aa23.29■■□□□ 1.32
CABP1-201ENST00000288616 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
CABP1-201ENST00000288616 COL4A5P29400 1685 aa23.29■■□□□ 1.32
CABP1-201ENST00000288616 PPEF1O14829 653 aaPredicted RBP23.28■■□□□ 1.32
CABP1-201ENST00000288616 NTSR2O95665 410 aa23.28■■□□□ 1.32
CABP1-201ENST00000288616 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
CABP1-201ENST00000288616 ADAMTSL1Q8N6G6 1762 aa23.28■■□□□ 1.32
CABP1-201ENST00000288616 ANXA1P04083 346 aa23.27■■□□□ 1.32
CABP1-201ENST00000288616 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
CABP1-201ENST00000288616 AIDAQ96BJ3 306 aa23.27■■□□□ 1.32
CABP1-201ENST00000288616 CRAMP1Q96RY5 1269 aa23.27■■□□□ 1.32
CABP1-201ENST00000288616 DEFB115Q30KQ5 88 aa23.27■■□□□ 1.31
CABP1-201ENST00000288616 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.31
CABP1-201ENST00000288616 IBTKQ9P2D0 1353 aaPredicted RBP23.26■■□□□ 1.31
CABP1-201ENST00000288616 EPS15P42566 896 aa23.26■■□□□ 1.31
CABP1-201ENST00000288616 RIPK4P57078 832 aa23.26■■□□□ 1.31
CABP1-201ENST00000288616 NLRP3Q96P20 1036 aa23.26■■□□□ 1.31
CABP1-201ENST00000288616 ABT1Q9ULW3 272 aaKnown RBP23.26■■□□□ 1.31
CABP1-201ENST00000288616 FMR1Q06787 632 aaKnown RBP eCLIP23.25■■□□□ 1.31
CABP1-201ENST00000288616 NECTIN2Q92692 538 aa23.25■■□□□ 1.31
CABP1-201ENST00000288616 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
CABP1-201ENST00000288616 RIC1Q4ADV7 1423 aa23.24■■□□□ 1.31
CABP1-201ENST00000288616 PDIA6Q15084 440 aa23.24■■□□□ 1.31
CABP1-201ENST00000288616 PROSER3Q2NL68 480 aa23.24■■□□□ 1.31
CABP1-201ENST00000288616 PARP10Q53GL7 1025 aa23.24■■□□□ 1.31
CABP1-201ENST00000288616 NIM1KQ8IY84 436 aa23.24■■□□□ 1.31
CABP1-201ENST00000288616 UTP14AQ9BVJ6 771 aaKnown RBP23.24■■□□□ 1.31
CABP1-201ENST00000288616 LTBP1Q14766 1721 aa23.23■■□□□ 1.31
CABP1-201ENST00000288616 PPIP5K2O43314 1243 aa23.23■■□□□ 1.31
CABP1-201ENST00000288616 CTCFP49711 727 aaPredicted RBP23.23■■□□□ 1.31
CABP1-201ENST00000288616 SCNN1DP51172 638 aa23.23■■□□□ 1.31
CABP1-201ENST00000288616 GRIPAP1Q4V328 841 aa23.23■■□□□ 1.31
CABP1-201ENST00000288616 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
CABP1-201ENST00000288616 AIMP1Q12904 312 aaKnown RBP23.22■■□□□ 1.31
CABP1-201ENST00000288616 AOC3Q16853 763 aa23.22■■□□□ 1.31
CABP1-201ENST00000288616 LRP10Q7Z4F1 713 aa23.22■■□□□ 1.31
CABP1-201ENST00000288616 PRDM10Q9NQV6 1147 aa23.22■■□□□ 1.31
CABP1-201ENST00000288616 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
CABP1-201ENST00000288616 RASSF10A6NK89 507 aa23.21■■□□□ 1.31
CABP1-201ENST00000288616 LBX1P52954 281 aa23.21■■□□□ 1.31
CABP1-201ENST00000288616 WBP1LQ9NX94 342 aa23.21■■□□□ 1.31
CABP1-201ENST00000288616 PAXIP1Q6ZW49 1069 aaPredicted RBP23.2■■□□□ 1.3
CABP1-201ENST00000288616 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
CABP1-201ENST00000288616 ATP6V0A2Q9Y487 856 aa23.2■■□□□ 1.3
CABP1-201ENST00000288616 WDR33Q9C0J8 1336 aaKnown RBP23.2■■□□□ 1.3
CABP1-201ENST00000288616 GRM1Q13255 1194 aa23.19■■□□□ 1.3
CABP1-201ENST00000288616 SLC10A5Q5PT55 438 aa23.19■■□□□ 1.3
CABP1-201ENST00000288616 COPS6Q7L5N1 327 aa23.19■■□□□ 1.3
CABP1-201ENST00000288616 ABCC4O15439 1325 aa23.19■■□□□ 1.3
CABP1-201ENST00000288616 HCLS1P14317 486 aaPredicted RBP23.18■■□□□ 1.3
CABP1-201ENST00000288616 NEUROD2Q15784 382 aa23.18■■□□□ 1.3
CABP1-201ENST00000288616 XAGE3Q8WTP9 111 aa23.18■■□□□ 1.3
CABP1-201ENST00000288616 TRAF5O00463 557 aa23.17■■□□□ 1.3
CABP1-201ENST00000288616 TMPOP42166 694 aaKnown RBP23.17■■□□□ 1.3
CABP1-201ENST00000288616 USP50Q70EL3 339 aaPredicted RBP23.17■■□□□ 1.3
CABP1-201ENST00000288616 CXCL9Q07325 125 aa23.15■■□□□ 1.3
CABP1-201ENST00000288616 DPP8Q6V1X1 898 aaPredicted RBP23.15■■□□□ 1.3
CABP1-201ENST00000288616 NLRP10Q86W26 655 aa23.15■■□□□ 1.3
CABP1-201ENST00000288616 CCDC146Q8IYE0 955 aa23.15■■□□□ 1.3
CABP1-201ENST00000288616 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
CABP1-201ENST00000288616 LAS1LQ9Y4W2 734 aaKnown RBP23.15■■□□□ 1.3
CABP1-201ENST00000288616 LMOD3Q0VAK6 560 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 KRT24Q2M2I5 525 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 HSP90AB3PQ58FF7 597 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 MPNDQ8N594 471 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 SUPT20HQ8NEM7 779 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 ZNRF3Q9ULT6 936 aa23.14■■□□□ 1.3
CABP1-201ENST00000288616 BBOX1O75936 387 aa23.14■■□□□ 1.29
CABP1-201ENST00000288616 HSPA8P11142 646 aaKnown RBP23.14■■□□□ 1.29
CABP1-201ENST00000288616 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
CABP1-201ENST00000288616 MAP2K1Q02750 393 aaPredicted RBP23.14■■□□□ 1.29
CABP1-201ENST00000288616 CYP4F22Q6NT55 531 aa23.14■■□□□ 1.29
CABP1-201ENST00000288616 DDX46Q7L014 1031 aaKnown RBP23.14■■□□□ 1.29
CABP1-201ENST00000288616 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
CABP1-201ENST00000288616 CAPNS2Q96L46 248 aa23.14■■□□□ 1.29
CABP1-201ENST00000288616 ADARB2Q9NS39 739 aaKnown RBP23.14■■□□□ 1.29
CABP1-201ENST00000288616 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.29
CABP1-201ENST00000288616 TAF1P21675 1872 aa23.13■■□□□ 1.29
CABP1-201ENST00000288616 GMPSP49915 693 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms