RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 ZSCAN31Q96LW9 406 aaPredicted RBP20.29■□□□□ 0.84
LRRC56-201ENST00000270115 SH2B1Q9NRF2 756 aaPredicted RBP20.29■□□□□ 0.84
LRRC56-201ENST00000270115 FOXO3O43524 673 aa20.29■□□□□ 0.84
LRRC56-201ENST00000270115 C11orf57Q6ZUT1 292 aaPredicted RBP20.29■□□□□ 0.84
LRRC56-201ENST00000270115 CCAR2Q8N163 923 aaKnown RBP20.29■□□□□ 0.84
LRRC56-201ENST00000270115 LEO1Q8WVC0 666 aaPredicted RBP20.29■□□□□ 0.84
LRRC56-201ENST00000270115 SLC20A2Q08357 652 aa20.29■□□□□ 0.84
LRRC56-201ENST00000270115 STK31Q9BXU1 1019 aa20.29■□□□□ 0.84
LRRC56-201ENST00000270115 ELP1O95163 1332 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 FBXW7Q969H0 707 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 PGBD1Q96JS3 809 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 FHOD1Q9Y613 1164 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 TTC21AQ8NDW8 1320 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 CCZ1BP86790 482 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 CCZ1P86791 482 aaPredicted RBP20.28■□□□□ 0.84
LRRC56-201ENST00000270115 FLIIQ13045 1269 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 SLFNL1Q499Z3 407 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 NEK11Q8NG66 645 aa20.28■□□□□ 0.84
LRRC56-201ENST00000270115 CDK12Q9NYV4 1490 aaPredicted RBP20.28■□□□□ 0.84
LRRC56-201ENST00000270115 CLCN6P51797 869 aa20.27■□□□□ 0.84
LRRC56-201ENST00000270115 EIF4A2Q14240 407 aaKnown RBP20.27■□□□□ 0.84
LRRC56-201ENST00000270115 SCAND2PQ9GZW5 306 aaPredicted RBP20.27■□□□□ 0.84
LRRC56-201ENST00000270115 AOX1Q06278 1338 aa20.27■□□□□ 0.83
LRRC56-201ENST00000270115 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.83
LRRC56-201ENST00000270115 CDC25BP30305 580 aa20.27■□□□□ 0.83
LRRC56-201ENST00000270115 GORABQ5T7V8 394 aa20.27■□□□□ 0.83
LRRC56-201ENST00000270115 LARP1Q6PKG0 1096 aaKnown RBP20.27■□□□□ 0.83
LRRC56-201ENST00000270115 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.83
LRRC56-201ENST00000270115 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
LRRC56-201ENST00000270115 RAD51AP2Q09MP3 1159 aa20.26■□□□□ 0.83
LRRC56-201ENST00000270115 STK3Q13188 491 aa20.26■□□□□ 0.83
LRRC56-201ENST00000270115 RBM43Q6ZSC3 357 aaKnown RBP20.26■□□□□ 0.83
LRRC56-201ENST00000270115 RHPN1Q8TCX5 695 aa20.26■□□□□ 0.83
LRRC56-201ENST00000270115 ZSWIM6Q9HCJ5 1215 aa20.26■□□□□ 0.83
LRRC56-201ENST00000270115 SOS1Q07889 1333 aaPredicted RBP20.26■□□□□ 0.83
LRRC56-201ENST00000270115 LTKP29376 864 aa20.26■□□□□ 0.83
LRRC56-201ENST00000270115 IQCB1Q15051 598 aa20.26■□□□□ 0.83
LRRC56-201ENST00000270115 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.26■□□□□ 0.83
LRRC56-201ENST00000270115 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
LRRC56-201ENST00000270115 BECN2A8MW95 431 aa20.25■□□□□ 0.83
LRRC56-201ENST00000270115 NEMFO60524 1076 aa20.25■□□□□ 0.83
LRRC56-201ENST00000270115 PNMA6AP0CW24 399 aaPredicted RBP20.25■□□□□ 0.83
LRRC56-201ENST00000270115 H2AFXP16104 143 aaPredicted RBP20.25■□□□□ 0.83
LRRC56-201ENST00000270115 PLA2G4AP47712 749 aa20.25■□□□□ 0.83
LRRC56-201ENST00000270115 SYT10Q6XYQ8 523 aa20.25■□□□□ 0.83
LRRC56-201ENST00000270115 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
LRRC56-201ENST00000270115 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
LRRC56-201ENST00000270115 RAB11FIP3O75154 756 aa20.24■□□□□ 0.83
LRRC56-201ENST00000270115 SNW1Q13573 536 aaKnown RBP20.24■□□□□ 0.83
LRRC56-201ENST00000270115 ARHGAP29Q52LW3 1261 aa20.24■□□□□ 0.83
LRRC56-201ENST00000270115 USP44Q9H0E7 712 aa20.24■□□□□ 0.83
LRRC56-201ENST00000270115 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
LRRC56-201ENST00000270115 DDX11Q96FC9 970 aa20.23■□□□□ 0.83
LRRC56-201ENST00000270115 MRFAP1L1Q96HT8 127 aa20.23■□□□□ 0.83
LRRC56-201ENST00000270115 SOX12O15370 315 aa20.23■□□□□ 0.83
LRRC56-201ENST00000270115 ZBTB9Q96C00 473 aa20.23■□□□□ 0.83
LRRC56-201ENST00000270115 WASLO00401 505 aaPredicted RBP20.23■□□□□ 0.83
LRRC56-201ENST00000270115 ZFP91Q96JP5 570 aaPredicted RBP20.23■□□□□ 0.83
LRRC56-201ENST00000270115 PDCP20941 246 aa20.22■□□□□ 0.83
LRRC56-201ENST00000270115 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
LRRC56-201ENST00000270115 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
LRRC56-201ENST00000270115 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
LRRC56-201ENST00000270115 ZKSCAN1P17029 563 aaPredicted RBP20.21■□□□□ 0.83
LRRC56-201ENST00000270115 RNF20Q5VTR2 975 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 SARM1Q6SZW1 724 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 NRXN3Q9Y4C0 1643 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 CRB1P82279 1406 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 ATP7BP35670 1465 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 SRGAP3O43295 1099 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 FAM193AP78312 1265 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 SSH3Q8TE77 659 aa20.21■□□□□ 0.83
LRRC56-201ENST00000270115 TNNT3P45378 269 aaPredicted RBP20.2■□□□□ 0.82
LRRC56-201ENST00000270115 ST5P78524 1137 aa20.2■□□□□ 0.82
LRRC56-201ENST00000270115 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
LRRC56-201ENST00000270115 TTC21BQ7Z4L5 1316 aa20.2■□□□□ 0.82
LRRC56-201ENST00000270115 CREBRFQ8IUR6 639 aa20.2■□□□□ 0.82
LRRC56-201ENST00000270115 SEC31AO94979 1220 aaKnown RBP20.19■□□□□ 0.82
LRRC56-201ENST00000270115 E4F1Q66K89 784 aaPredicted RBP20.19■□□□□ 0.82
LRRC56-201ENST00000270115 NUDT16Q96DE0 195 aaKnown RBP20.19■□□□□ 0.82
LRRC56-201ENST00000270115 RBM8AQ9Y5S9 174 aaKnown RBP20.19■□□□□ 0.82
LRRC56-201ENST00000270115 AATKQ6ZMQ8 1374 aa20.19■□□□□ 0.82
LRRC56-201ENST00000270115 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
LRRC56-201ENST00000270115 TEX35Q5T0J7 233 aa20.19■□□□□ 0.82
LRRC56-201ENST00000270115 KRBA2Q6ZNG9 492 aa20.19■□□□□ 0.82
LRRC56-201ENST00000270115 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
LRRC56-201ENST00000270115 TM6SF1Q9BZW5 370 aa20.19■□□□□ 0.82
LRRC56-201ENST00000270115 OS9Q13438 667 aaPredicted RBP20.18■□□□□ 0.82
LRRC56-201ENST00000270115 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 CREB3L3Q68CJ9 461 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 PPP1R13BQ96KQ4 1090 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 TSPYL1Q9H0U9 437 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
LRRC56-201ENST00000270115 NECTIN1Q15223 517 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 TMCO3Q6UWJ1 677 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 L2HGDHQ9H9P8 463 aa20.18■□□□□ 0.82
LRRC56-201ENST00000270115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.18■□□□□ 0.82
LRRC56-201ENST00000270115 JAK2O60674 1132 aa20.17■□□□□ 0.82
LRRC56-201ENST00000270115 FOSBP53539 338 aa20.17■□□□□ 0.82
LRRC56-201ENST00000270115 STX1AQ16623 288 aa20.17■□□□□ 0.82
LRRC56-201ENST00000270115 DHX40Q8IX18 779 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms