RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
XRCC1-201ENST00000262887 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
XRCC1-201ENST00000262887 SETD1AO15047 1707 aaKnown RBP17.68■□□□□ 0.42
XRCC1-201ENST00000262887 LRRC8AQ8IWT6 810 aa17.68■□□□□ 0.42
XRCC1-201ENST00000262887 TFIP11Q9UBB9 837 aaKnown RBP17.68■□□□□ 0.42
XRCC1-201ENST00000262887 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.67■□□□□ 0.42
XRCC1-201ENST00000262887 V9GYY5 206 aaPredicted RBP17.67■□□□□ 0.42
XRCC1-201ENST00000262887 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 NEO1Q92859 1461 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 RIMS1Q86UR5 1692 aaKnown RBP17.67■□□□□ 0.42
XRCC1-201ENST00000262887 PRR36Q9H6K5 1346 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 OVOS2A0A0J9YW53 1432 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 OVOS2Q6IE36 1432 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 NEMFO60524 1076 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
XRCC1-201ENST00000262887 FBXO38Q6PIJ6 1188 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 ERO1AQ96HE7 468 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 USP27XA6NNY8 438 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
XRCC1-201ENST00000262887 NR1I2O75469 434 aa17.66■□□□□ 0.42
XRCC1-201ENST00000262887 FAM193AP78312 1265 aa17.66■□□□□ 0.42
XRCC1-201ENST00000262887 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
XRCC1-201ENST00000262887 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
XRCC1-201ENST00000262887 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
XRCC1-201ENST00000262887 NECTIN1Q15223 517 aa17.66■□□□□ 0.42
XRCC1-201ENST00000262887 KCNB2Q92953 911 aa17.66■□□□□ 0.42
XRCC1-201ENST00000262887 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 METP08581 1390 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 GOLGA6L19H0YKK7 550 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 CAVIN2O95810 425 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 ELF2Q15723 593 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 HSP90AB4PQ58FF6 505 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 CALCOCO1Q9P1Z2 691 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 A2ML1A8K2U0 1454 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 ERICH4A6NGS2 130 aa17.65■□□□□ 0.42
XRCC1-201ENST00000262887 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
XRCC1-201ENST00000262887 RICTORQ6R327 1708 aa17.64■□□□□ 0.42
XRCC1-201ENST00000262887 SKILP12757 684 aa17.64■□□□□ 0.41
XRCC1-201ENST00000262887 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
XRCC1-201ENST00000262887 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
XRCC1-201ENST00000262887 CEBPAP49715 358 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-201ENST00000262887 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-201ENST00000262887 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
XRCC1-201ENST00000262887 SARM1Q6SZW1 724 aa17.64■□□□□ 0.41
XRCC1-201ENST00000262887 CREBRFQ8IUR6 639 aa17.64■□□□□ 0.41
XRCC1-201ENST00000262887 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
XRCC1-201ENST00000262887 N4BP2Q86UW6 1770 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-201ENST00000262887 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
XRCC1-201ENST00000262887 ARID5BQ14865 1188 aa17.63■□□□□ 0.41
XRCC1-201ENST00000262887 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
XRCC1-201ENST00000262887 MRFAP1L1Q96HT8 127 aa17.63■□□□□ 0.41
XRCC1-201ENST00000262887 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
XRCC1-201ENST00000262887 PSMA5P28066 241 aa17.63■□□□□ 0.41
XRCC1-201ENST00000262887 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
XRCC1-201ENST00000262887 ACEP12821 1306 aa17.63■□□□□ 0.41
XRCC1-201ENST00000262887 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
XRCC1-201ENST00000262887 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
XRCC1-201ENST00000262887 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 KDRP35968 1356 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
XRCC1-201ENST00000262887 IRX3P78415 501 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-201ENST00000262887 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
XRCC1-201ENST00000262887 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 ST7Q9NRC1 585 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 ECHDC1Q9NTX5 307 aa17.62■□□□□ 0.41
XRCC1-201ENST00000262887 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
XRCC1-201ENST00000262887 IQCB1Q15051 598 aa17.61■□□□□ 0.41
XRCC1-201ENST00000262887 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
XRCC1-201ENST00000262887 TRMT1Q9NXH9 659 aaKnown RBP17.61■□□□□ 0.41
XRCC1-201ENST00000262887 CACNA1FO60840 1977 aa17.61■□□□□ 0.41
XRCC1-201ENST00000262887 BLOC1S2Q6QNY1 142 aa17.61■□□□□ 0.41
XRCC1-201ENST00000262887 TEX2Q8IWB9 1127 aa17.61■□□□□ 0.41
XRCC1-201ENST00000262887 USP31Q70CQ4 1352 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
XRCC1-201ENST00000262887 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
XRCC1-201ENST00000262887 CCAR2Q8N163 923 aaKnown RBP17.6■□□□□ 0.41
XRCC1-201ENST00000262887 EYA1Q99502 592 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 ZNF446Q9NWS9 450 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 ERBB3P21860 1342 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 NUTM2FA1L443 756 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 STK3Q13188 491 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 EVI5LQ96CN4 794 aa17.6■□□□□ 0.41
XRCC1-201ENST00000262887 NOL10Q9BSC4 688 aaKnown RBP17.6■□□□□ 0.41
XRCC1-201ENST00000262887 KIF2AO00139 706 aaPredicted RBP17.59■□□□□ 0.41
XRCC1-201ENST00000262887 SLC27A2O14975 620 aa17.59■□□□□ 0.41
XRCC1-201ENST00000262887 CCZ1BP86790 482 aa17.59■□□□□ 0.41
XRCC1-201ENST00000262887 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
XRCC1-201ENST00000262887 FILIP1Q7Z7B0 1213 aa17.59■□□□□ 0.41
XRCC1-201ENST00000262887 MAP4K1Q92918 833 aa17.59■□□□□ 0.41
XRCC1-201ENST00000262887 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
XRCC1-201ENST00000262887 FLT4P35916 1363 aa17.59■□□□□ 0.41
XRCC1-201ENST00000262887 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
XRCC1-201ENST00000262887 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms