RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
VAMP7-201ENST00000262640 ZBTB38Q8NAP3 1195 aaPredicted RBP16.1■□□□□ 0.17
VAMP7-201ENST00000262640 GPTP24298 496 aa16.09■□□□□ 0.17
VAMP7-201ENST00000262640 FOXO4P98177 505 aa16.09■□□□□ 0.17
VAMP7-201ENST00000262640 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
VAMP7-201ENST00000262640 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
VAMP7-201ENST00000262640 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
VAMP7-201ENST00000262640 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
VAMP7-201ENST00000262640 NUP98P52948 1817 aa16.08■□□□□ 0.17
VAMP7-201ENST00000262640 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.17
VAMP7-201ENST00000262640 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.17
VAMP7-201ENST00000262640 PLEKHM2Q8IWE5 1019 aa16.08■□□□□ 0.17
VAMP7-201ENST00000262640 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
VAMP7-201ENST00000262640 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.16
VAMP7-201ENST00000262640 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
VAMP7-201ENST00000262640 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
VAMP7-201ENST00000262640 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
VAMP7-201ENST00000262640 GNPATO15228 680 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
VAMP7-201ENST00000262640 POTEAQ6S8J7 498 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
VAMP7-201ENST00000262640 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 TAF1LQ8IZX4 1826 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
VAMP7-201ENST00000262640 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
VAMP7-201ENST00000262640 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
VAMP7-201ENST00000262640 BCORQ6W2J9 1755 aa16.06■□□□□ 0.16
VAMP7-201ENST00000262640 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.16
VAMP7-201ENST00000262640 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
VAMP7-201ENST00000262640 COPRSQ9NQ92 184 aa16.06■□□□□ 0.16
VAMP7-201ENST00000262640 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
VAMP7-201ENST00000262640 C4BP0C0L5 1744 aa16.06■□□□□ 0.16
VAMP7-201ENST00000262640 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
VAMP7-201ENST00000262640 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
VAMP7-201ENST00000262640 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
VAMP7-201ENST00000262640 AK7Q96M32 723 aa16.05■□□□□ 0.16
VAMP7-201ENST00000262640 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
VAMP7-201ENST00000262640 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
VAMP7-201ENST00000262640 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
VAMP7-201ENST00000262640 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
VAMP7-201ENST00000262640 SCN7AQ01118 1682 aa16.04■□□□□ 0.16
VAMP7-201ENST00000262640 PTPN12Q05209 780 aaKnown RBP16.04■□□□□ 0.16
VAMP7-201ENST00000262640 UTP14AQ9BVJ6 771 aaKnown RBP16.04■□□□□ 0.16
VAMP7-201ENST00000262640 IL1RAPL2Q9NP60 686 aa16.04■□□□□ 0.16
VAMP7-201ENST00000262640 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
VAMP7-201ENST00000262640 CHMP3Q9Y3E7 222 aa16.04■□□□□ 0.16
VAMP7-201ENST00000262640 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
VAMP7-201ENST00000262640 TTC22Q5TAA0 569 aa16.03■□□□□ 0.16
VAMP7-201ENST00000262640 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
VAMP7-201ENST00000262640 PDE1AP54750 535 aa16.03■□□□□ 0.16
VAMP7-201ENST00000262640 SUSD4Q5VX71 490 aa16.03■□□□□ 0.16
VAMP7-201ENST00000262640 PLSCR1O15162 318 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 ZPR1O75312 459 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 CSF1RP07333 972 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 ADRA2BP18089 450 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 MX1P20591 662 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 SIL1Q9H173 461 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 STAP2Q9UGK3 403 aa16.02■□□□□ 0.16
VAMP7-201ENST00000262640 AOX1Q06278 1338 aa16.02■□□□□ 0.15
VAMP7-201ENST00000262640 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.15
VAMP7-201ENST00000262640 HSP90B1P14625 803 aaKnown RBP16.02■□□□□ 0.15
VAMP7-201ENST00000262640 TXNRD1Q16881 649 aa16.02■□□□□ 0.15
VAMP7-201ENST00000262640 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.15
VAMP7-201ENST00000262640 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.15
VAMP7-201ENST00000262640 PDE8AO60658 829 aa16.01■□□□□ 0.15
VAMP7-201ENST00000262640 SASH1O94885 1247 aa16.01■□□□□ 0.15
VAMP7-201ENST00000262640 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
VAMP7-201ENST00000262640 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
VAMP7-201ENST00000262640 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
VAMP7-201ENST00000262640 CTSWP56202 376 aa16.01■□□□□ 0.15
VAMP7-201ENST00000262640 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
VAMP7-201ENST00000262640 NTSR2O95665 410 aa16■□□□□ 0.15
VAMP7-201ENST00000262640 APBA3O96018 575 aa16■□□□□ 0.15
VAMP7-201ENST00000262640 GSPT1P15170 499 aaKnown RBP16■□□□□ 0.15
VAMP7-201ENST00000262640 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
VAMP7-201ENST00000262640 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
VAMP7-201ENST00000262640 RFC4P35249 363 aa16■□□□□ 0.15
VAMP7-201ENST00000262640 SMIM5Q71RC9 77 aa16■□□□□ 0.15
VAMP7-201ENST00000262640 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
VAMP7-201ENST00000262640 USP42Q9H9J4 1324 aaKnown RBP15.99■□□□□ 0.15
VAMP7-201ENST00000262640 AMIGO3Q86WK7 504 aa15.99■□□□□ 0.15
VAMP7-201ENST00000262640 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
VAMP7-201ENST00000262640 TTLL11Q8NHH1 800 aa15.99■□□□□ 0.15
VAMP7-201ENST00000262640 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
VAMP7-201ENST00000262640 PROM2Q8N271 834 aa15.99■□□□□ 0.15
VAMP7-201ENST00000262640 EP400Q96L91 3159 aa15.98■□□□□ 0.15
VAMP7-201ENST00000262640 CIAO1O76071 339 aa15.98■□□□□ 0.15
VAMP7-201ENST00000262640 PHF14O94880 888 aa15.98■□□□□ 0.15
VAMP7-201ENST00000262640 SSFA2P28290 1259 aa15.98■□□□□ 0.15
VAMP7-201ENST00000262640 IFIT5Q13325 482 aaKnown RBP15.98■□□□□ 0.15
VAMP7-201ENST00000262640 FAM177BA6PVY3 158 aa15.97■□□□□ 0.15
VAMP7-201ENST00000262640 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
VAMP7-201ENST00000262640 TBC1D9BQ66K14 1250 aa15.97■□□□□ 0.15
VAMP7-201ENST00000262640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
VAMP7-201ENST00000262640 EYA2O00167 538 aa15.97■□□□□ 0.15
VAMP7-201ENST00000262640 IL15P40933 162 aaPredicted RBP15.97■□□□□ 0.15
VAMP7-201ENST00000262640 AACSQ86V21 672 aa15.97■□□□□ 0.15
VAMP7-201ENST00000262640 GPATCH3Q96I76 525 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms