RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 TYRO3Q06418 890 aa17.45■□□□□ 0.38
KCTD3-201ENST00000259154 LEKR1Q6ZMV7 388 aa17.45■□□□□ 0.38
KCTD3-201ENST00000259154 GPATCH11Q8N954 259 aa17.45■□□□□ 0.38
KCTD3-201ENST00000259154 DCTPP1Q9H773 170 aa17.45■□□□□ 0.38
KCTD3-201ENST00000259154 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
KCTD3-201ENST00000259154 ANKRD44Q8N8A2 993 aa17.44■□□□□ 0.38
KCTD3-201ENST00000259154 IPO4Q8TEX9 1081 aaKnown RBP17.44■□□□□ 0.38
KCTD3-201ENST00000259154 PCMTD1Q96MG8 357 aaPredicted RBP17.44■□□□□ 0.38
KCTD3-201ENST00000259154 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
KCTD3-201ENST00000259154 MSH6P52701 1360 aa17.44■□□□□ 0.38
KCTD3-201ENST00000259154 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
KCTD3-201ENST00000259154 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
KCTD3-201ENST00000259154 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
KCTD3-201ENST00000259154 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 MTHFSDQ2M296 383 aaKnown RBP17.43■□□□□ 0.38
KCTD3-201ENST00000259154 DNAI1Q9UI46 699 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 TTC21BQ7Z4L5 1316 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 KIF20BQ96Q89 1820 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 PHACTR2O75167 634 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 H0YHG0 523 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 F13A1P00488 732 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
KCTD3-201ENST00000259154 ELF2Q15723 593 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 C10orf67Q8IYJ2 551 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 FAM200AQ8TCP9 573 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 GTPBP4Q9BZE4 634 aaKnown RBP17.43■□□□□ 0.38
KCTD3-201ENST00000259154 C3P01024 1663 aa17.43■□□□□ 0.38
KCTD3-201ENST00000259154 CPSF1Q10570 1443 aaKnown RBP17.42■□□□□ 0.38
KCTD3-201ENST00000259154 MAP3K19Q56UN5 1328 aa17.42■□□□□ 0.38
KCTD3-201ENST00000259154 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
KCTD3-201ENST00000259154 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
KCTD3-201ENST00000259154 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
KCTD3-201ENST00000259154 SNW1Q13573 536 aaKnown RBP17.42■□□□□ 0.38
KCTD3-201ENST00000259154 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
KCTD3-201ENST00000259154 MYL6BP14649 208 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
KCTD3-201ENST00000259154 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 MCM6Q14566 821 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 CALCOCO1Q9P1Z2 691 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
KCTD3-201ENST00000259154 SYT10Q6XYQ8 523 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 FLIIQ13045 1269 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 CWC15Q9P013 229 aaKnown RBP17.4■□□□□ 0.38
KCTD3-201ENST00000259154 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
KCTD3-201ENST00000259154 LIG1P18858 919 aa17.39■□□□□ 0.37
KCTD3-201ENST00000259154 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
KCTD3-201ENST00000259154 LMOD1P29536 600 aaPredicted RBP17.39■□□□□ 0.37
KCTD3-201ENST00000259154 PPARDQ03181 441 aa17.39■□□□□ 0.37
KCTD3-201ENST00000259154 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.37
KCTD3-201ENST00000259154 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.37
KCTD3-201ENST00000259154 AOPEPQ8N6M6 819 aa17.39■□□□□ 0.37
KCTD3-201ENST00000259154 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
KCTD3-201ENST00000259154 TRIM29Q14134 588 aa17.38■□□□□ 0.37
KCTD3-201ENST00000259154 AK7Q96M32 723 aa17.38■□□□□ 0.37
KCTD3-201ENST00000259154 PA2G4Q9UQ80 394 aaKnown RBP17.38■□□□□ 0.37
KCTD3-201ENST00000259154 CHMLP26374 656 aa17.38■□□□□ 0.37
KCTD3-201ENST00000259154 CHST3Q7LGC8 479 aa17.38■□□□□ 0.37
KCTD3-201ENST00000259154 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
KCTD3-201ENST00000259154 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
KCTD3-201ENST00000259154 ANKLE2Q86XL3 938 aa17.38■□□□□ 0.37
KCTD3-201ENST00000259154 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
KCTD3-201ENST00000259154 PTCH1Q13635 1447 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 CCDC69A6NI79 296 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 ATF3P18847 181 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 TSR1Q2NL82 804 aaKnown RBP17.37■□□□□ 0.37
KCTD3-201ENST00000259154 TPM1P09493 284 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 CHL1O00533 1208 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
KCTD3-201ENST00000259154 RRP12Q5JTH9 1297 aaKnown RBP17.37■□□□□ 0.37
KCTD3-201ENST00000259154 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
KCTD3-201ENST00000259154 ARHGAP45Q92619 1136 aa17.37■□□□□ 0.37
KCTD3-201ENST00000259154 CAGE1Q8TC20 777 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 EYA1Q99502 592 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 ATP7BP35670 1465 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 DDIT3P35638 169 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 TSPYL1Q9H0U9 437 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 NAP1L1P55209 391 aaKnown RBP17.36■□□□□ 0.37
KCTD3-201ENST00000259154 DMTNQ08495 405 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
KCTD3-201ENST00000259154 SETD1BQ9UPS6 1966 aaKnown RBP17.36■□□□□ 0.37
KCTD3-201ENST00000259154 PTPN21Q16825 1174 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 ZSCAN31Q96LW9 406 aaPredicted RBP17.35■□□□□ 0.37
KCTD3-201ENST00000259154 RABEP2Q9H5N1 569 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 OGFRQ9NZT2 677 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 ZNF215Q9UL58 517 aaPredicted RBP17.35■□□□□ 0.37
KCTD3-201ENST00000259154 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 KIF20AO95235 890 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 GNG11P61952 73 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 CENPHQ9H3R5 247 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms