RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 DDX46Q7L014 1031 aaKnown RBP10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 DBNDD2Q9BQY9 259 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 CCDC87Q9NVE4 849 aa10.53□□□□□ -0.72
CALCOCO2-201ENST00000258947 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 TTC41PQ6P2S7 1318 aa10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 IRS4O14654 1257 aaPredicted RBP10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 CRKLP46109 303 aaKnown RBP10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 VSIG10Q8N0Z9 540 aa10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 SMARCC1Q92922 1105 aaPredicted RBP10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 EDC3Q96F86 508 aaKnown RBP10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 NIP7Q9Y221 180 aaKnown RBP eCLIP10.52□□□□□ -0.72
CALCOCO2-201ENST00000258947 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 PHF14O94880 888 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 CYP19A1P11511 503 aaPredicted RBP10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 HCLS1P14317 486 aaPredicted RBP10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 SNRKQ9NRH2 765 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 PTPN12Q05209 780 aaKnown RBP10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 TNNI3KQ59H18 835 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 EVI5LQ96CN4 794 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 CHMP5Q9NZZ3 219 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 STAP2Q9UGK3 403 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 NAP1L2Q9ULW6 460 aaPredicted RBP10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 FPGT-TNNI3KV9GXZ4 949 aa10.52□□□□□ -0.73
CALCOCO2-201ENST00000258947 JCADQ9P266 1359 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 LRRC24Q50LG9 513 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 GOLIM4O00461 696 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 HSPA1LP34931 641 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 CCDC158Q5M9N0 1113 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 COL18A1P39060 1754 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 IL15P40933 162 aaPredicted RBP10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 PI4K2BQ8TCG2 481 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 CERKQ8TCT0 537 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 PUS3Q9BZE2 481 aaKnown RBP10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 COPRSQ9NQ92 184 aa10.51□□□□□ -0.73
CALCOCO2-201ENST00000258947 H7C1W4 665 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 IFIT1P09914 478 aaKnown RBP10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 WASHC4Q2M389 1173 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 SMIM5Q71RC9 77 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 PALLDQ8WX93 1383 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 EYA2O00167 538 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 PRPF40BQ6NWY9 871 aaKnown RBP10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 HELBQ8NG08 1087 aaPredicted RBP10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 GZF1Q9H116 711 aaPredicted RBP10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 ZNF652Q9Y2D9 606 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 KDM3BQ7LBC6 1761 aa10.5□□□□□ -0.73
CALCOCO2-201ENST00000258947 IL6STP40189 918 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 LRP10Q7Z4F1 713 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 ABCC6O95255 1503 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 HIP1O00291 1037 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 ITGA6P23229 1130 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 FOXD4L6Q3SYB3 417 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 FOXD4L3Q6VB84 417 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 DBNLQ9UJU6 430 aaKnown RBP10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 AOX1Q06278 1338 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 GNPATO15228 680 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 ZPR1O75312 459 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 NLRP10Q86W26 655 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 FAM227BQ96M60 508 aa10.49□□□□□ -0.73
CALCOCO2-201ENST00000258947 A0A1B0GUL7 405 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 NCLP19338 710 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 NMIQ13287 307 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 CCNL1Q9UK58 526 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 PCCAP05165 728 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 CCDC24Q8N4L8 307 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 UTP14AQ9BVJ6 771 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 UTYO14607 1347 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 GOLGA6L22H0YM25 854 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 GREM2Q9H772 168 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 AKAP2Q9Y2D5 859 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 BCL9O00512 1426 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 AFF2P51816 1311 aa10.48□□□□□ -0.73
CALCOCO2-201ENST00000258947 FOXO4P98177 505 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 VPS72Q15906 364 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 PALD1Q9ULE6 856 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 SH3TC1Q8TE82 1336 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 SCN11AQ9UI33 1791 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 PLEKHG2Q9H7P9 1386 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 DEKP35659 375 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 ITPK1Q13572 414 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 ISCA1Q9BUE6 129 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 PARP4Q9UKK3 1724 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 SGSM2O43147 1006 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 CASTP20810 708 aaKnown RBP10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms