RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SEC62Q99442 399 aaKnown RBP20■□□□□ 0.79
SGPP1-201ENST00000247225 FLT4P35916 1363 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 GOLGA6L19H0YKK7 550 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 TNNT1P13805 278 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 BEND3Q5T5X7 828 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 NBPF6Q5VWK0 638 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 NBPF4Q96M43 638 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 A2ML1A8K2U0 1454 aa20■□□□□ 0.79
SGPP1-201ENST00000247225 KIAA1524Q8TCG1 905 aa19.99■□□□□ 0.79
SGPP1-201ENST00000247225 BECN2A8MW95 431 aa19.99■□□□□ 0.79
SGPP1-201ENST00000247225 HSP90AB4PQ58FF6 505 aa19.99■□□□□ 0.79
SGPP1-201ENST00000247225 DLG5Q8TDM6 1919 aa19.99■□□□□ 0.79
SGPP1-201ENST00000247225 ST3GAL1Q11201 340 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 ZNF589Q86UQ0 364 aaPredicted RBP19.98■□□□□ 0.79
SGPP1-201ENST00000247225 FAM200AQ8TCP9 573 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 CLIP2Q9UDT6 1046 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 CCDC171Q6TFL3 1326 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 SLC27A2O14975 620 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 ISM2Q6H9L7 571 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 NEUROD6Q96NK8 337 aa19.98■□□□□ 0.79
SGPP1-201ENST00000247225 BICC1Q9H694 974 aaKnown RBP19.98■□□□□ 0.79
SGPP1-201ENST00000247225 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
SGPP1-201ENST00000247225 ZNF771Q7L3S4 317 aaPredicted RBP19.97■□□□□ 0.79
SGPP1-201ENST00000247225 PRDM4Q9UKN5 801 aa19.97■□□□□ 0.79
SGPP1-201ENST00000247225 MRVI1Q9Y6F6 885 aa19.97■□□□□ 0.79
SGPP1-201ENST00000247225 DIP2CQ9Y2E4 1556 aa19.97■□□□□ 0.79
SGPP1-201ENST00000247225 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
SGPP1-201ENST00000247225 EIF4A1P60842 406 aaKnown RBP19.97■□□□□ 0.79
SGPP1-201ENST00000247225 C1orf141Q5JVX7 400 aa19.97■□□□□ 0.79
SGPP1-201ENST00000247225 ZNF330Q9Y3S2 320 aaPredicted RBP19.97■□□□□ 0.79
SGPP1-201ENST00000247225 DDX46Q7L014 1031 aaKnown RBP19.96■□□□□ 0.79
SGPP1-201ENST00000247225 BRF1Q92994 677 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 SUCLG2Q96I99 432 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 ZSCAN31Q96LW9 406 aaPredicted RBP19.96■□□□□ 0.79
SGPP1-201ENST00000247225 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 STK11IPQ8N1F8 1099 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 ATP5J2-PTCD1G3V325 749 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
SGPP1-201ENST00000247225 PSME1Q06323 249 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 USP16Q9Y5T5 823 aa19.96■□□□□ 0.79
SGPP1-201ENST00000247225 MAP3K5Q99683 1374 aa19.95■□□□□ 0.78
SGPP1-201ENST00000247225 EVI5LQ96CN4 794 aa19.95■□□□□ 0.78
SGPP1-201ENST00000247225 SH2B1Q9NRF2 756 aaPredicted RBP19.95■□□□□ 0.78
SGPP1-201ENST00000247225 KIF20BQ96Q89 1820 aa19.95■□□□□ 0.78
SGPP1-201ENST00000247225 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
SGPP1-201ENST00000247225 ZSWIM6Q9HCJ5 1215 aa19.95■□□□□ 0.78
SGPP1-201ENST00000247225 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
SGPP1-201ENST00000247225 PSMA5P28066 241 aa19.94■□□□□ 0.78
SGPP1-201ENST00000247225 POLA2Q14181 598 aa19.94■□□□□ 0.78
SGPP1-201ENST00000247225 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
SGPP1-201ENST00000247225 GORABQ5T7V8 394 aa19.94■□□□□ 0.78
SGPP1-201ENST00000247225 BIN1O00499 593 aa19.94■□□□□ 0.78
SGPP1-201ENST00000247225 NCOA5Q9HCD5 579 aaKnown RBP19.94■□□□□ 0.78
SGPP1-201ENST00000247225 USP6P35125 1406 aa19.93■□□□□ 0.78
SGPP1-201ENST00000247225 LEO1Q8WVC0 666 aaPredicted RBP19.93■□□□□ 0.78
SGPP1-201ENST00000247225 OTUD7BQ6GQQ9 843 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 CCDC112Q8NEF3 446 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 SBNO1A3KN83 1393 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
SGPP1-201ENST00000247225 ZRSR1Q15695 479 aaKnown RBP19.92■□□□□ 0.78
SGPP1-201ENST00000247225 Q6ZUG5 572 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 CCDC85AQ96PX6 553 aaPredicted RBP19.92■□□□□ 0.78
SGPP1-201ENST00000247225 SASH1O94885 1247 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 ME1P48163 572 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 SMAP1Q8IYB5 467 aaPredicted RBP19.92■□□□□ 0.78
SGPP1-201ENST00000247225 MYD88Q99836 296 aa19.92■□□□□ 0.78
SGPP1-201ENST00000247225 PDCP20941 246 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 NECTIN1Q15223 517 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 CACTINQ8WUQ7 758 aaKnown RBP19.91■□□□□ 0.78
SGPP1-201ENST00000247225 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 TMEM87AQ8NBN3 555 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 FUCA2Q9BTY2 467 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 DBF4Q9UBU7 674 aaPredicted RBP19.91■□□□□ 0.78
SGPP1-201ENST00000247225 RIMS1Q86UR5 1692 aaKnown RBP19.91■□□□□ 0.78
SGPP1-201ENST00000247225 CCDC144BQ3MJ40 725 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 CCDC144CPQ8IYA2 1237 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 SDF4Q9BRK5 362 aa19.91■□□□□ 0.78
SGPP1-201ENST00000247225 CEP170BQ9Y4F5 1589 aaPredicted RBP19.9■□□□□ 0.78
SGPP1-201ENST00000247225 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
SGPP1-201ENST00000247225 KCNA6P17658 529 aa19.9■□□□□ 0.78
SGPP1-201ENST00000247225 PGBD1Q96JS3 809 aa19.89■□□□□ 0.78
SGPP1-201ENST00000247225 SSH2Q76I76 1423 aa19.89■□□□□ 0.78
SGPP1-201ENST00000247225 USP27XA6NNY8 438 aa19.89■□□□□ 0.77
SGPP1-201ENST00000247225 ZC3H6P61129 1189 aaKnown RBP19.89■□□□□ 0.77
SGPP1-201ENST00000247225 SF3A1Q15459 793 aaKnown RBP19.89■□□□□ 0.77
SGPP1-201ENST00000247225 ZSCAN25Q6NSZ9 544 aa19.89■□□□□ 0.77
SGPP1-201ENST00000247225 SCAND2PQ9GZW5 306 aaPredicted RBP19.89■□□□□ 0.77
SGPP1-201ENST00000247225 CDC42BPGQ6DT37 1551 aa19.89■□□□□ 0.77
SGPP1-201ENST00000247225 GRM8O00222 908 aa19.89■□□□□ 0.77
SGPP1-201ENST00000247225 ZSCAN20P17040 1043 aaPredicted RBP19.89■□□□□ 0.77
SGPP1-201ENST00000247225 ZNF75DP51815 510 aa19.89■□□□□ 0.77
SGPP1-201ENST00000247225 APOBRQ0VD83 1088 aa19.88■□□□□ 0.77
SGPP1-201ENST00000247225 POLR3DP05423 398 aaPredicted RBP19.88■□□□□ 0.77
SGPP1-201ENST00000247225 CCAR1Q8IX12 1150 aaKnown RBP19.88■□□□□ 0.77
SGPP1-201ENST00000247225 TMX1Q9H3N1 280 aa19.88■□□□□ 0.77
SGPP1-201ENST00000247225 NEO1Q92859 1461 aa19.88■□□□□ 0.77
SGPP1-201ENST00000247225 RPS6KB1P23443 525 aa19.87■□□□□ 0.77
SGPP1-201ENST00000247225 HSP90AB3PQ58FF7 597 aa19.87■□□□□ 0.77
SGPP1-201ENST00000247225 C11orf57Q6ZUT1 292 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms