RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 EXOC5O00471 708 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 ADCY5O95622 1261 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 KIAA1524Q8TCG1 905 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 RNF216Q9NWF9 866 aaPredicted RBP23.81■■□□□ 1.4
HOXC13-201ENST00000243056 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 ZNF428Q96B54 188 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
HOXC13-201ENST00000243056 USP21Q9UK80 565 aa23.81■■□□□ 1.4
HOXC13-201ENST00000243056 MBD3O95983 291 aa23.8■■□□□ 1.4
HOXC13-201ENST00000243056 FEZ2Q9UHY8 353 aaPredicted RBP23.8■■□□□ 1.4
HOXC13-201ENST00000243056 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
HOXC13-201ENST00000243056 KIF18AQ8NI77 898 aa23.8■■□□□ 1.4
HOXC13-201ENST00000243056 CHPF2Q9P2E5 772 aa23.8■■□□□ 1.4
HOXC13-201ENST00000243056 GIGYF1O75420 1035 aaPredicted RBP23.79■■□□□ 1.4
HOXC13-201ENST00000243056 BRD2P25440 801 aaKnown RBP23.79■■□□□ 1.4
HOXC13-201ENST00000243056 FAM182BQ5T319 152 aa23.79■■□□□ 1.4
HOXC13-201ENST00000243056 PARP4Q9UKK3 1724 aaKnown RBP23.79■■□□□ 1.4
HOXC13-201ENST00000243056 DISP2A7MBM2 1401 aa23.79■■□□□ 1.4
HOXC13-201ENST00000243056 IPO8O15397 1037 aaKnown RBP23.79■■□□□ 1.4
HOXC13-201ENST00000243056 NAA30Q147X3 362 aaPredicted RBP23.79■■□□□ 1.4
HOXC13-201ENST00000243056 PROSER3Q2NL68 480 aa23.79■■□□□ 1.4
HOXC13-201ENST00000243056 KCNF1Q9H3M0 494 aa23.79■■□□□ 1.4
HOXC13-201ENST00000243056 SCN11AQ9UI33 1791 aa23.78■■□□□ 1.4
HOXC13-201ENST00000243056 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
HOXC13-201ENST00000243056 SHANK3Q9BYB0 1731 aa23.78■■□□□ 1.4
HOXC13-201ENST00000243056 ACSBG1Q96GR2 724 aa23.77■■□□□ 1.4
HOXC13-201ENST00000243056 STK31Q9BXU1 1019 aa23.77■■□□□ 1.4
HOXC13-201ENST00000243056 NRAPQ86VF7 1730 aa23.77■■□□□ 1.4
HOXC13-201ENST00000243056 BRPF1P55201 1214 aaPredicted RBP23.76■■□□□ 1.39
HOXC13-201ENST00000243056 DDB1Q16531 1140 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 FOXD4L5Q5VV16 416 aaPredicted RBP23.76■■□□□ 1.39
HOXC13-201ENST00000243056 CCDC30Q5VVM6 783 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 SLC4A10Q6U841 1118 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 CHD1LQ86WJ1 897 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 FOXD4L4Q8WXT5 416 aaPredicted RBP23.76■■□□□ 1.39
HOXC13-201ENST00000243056 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 SPATA31A6Q5VVP1 1343 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 RABEP1Q15276 862 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 SYCP1Q15431 976 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 TSPYL1Q9H0U9 437 aa23.76■■□□□ 1.39
HOXC13-201ENST00000243056 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
HOXC13-201ENST00000243056 KRT222Q8N1A0 295 aa23.75■■□□□ 1.39
HOXC13-201ENST00000243056 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
HOXC13-201ENST00000243056 C1orf115Q9H7X2 142 aa23.75■■□□□ 1.39
HOXC13-201ENST00000243056 CWC22Q9HCG8 908 aaKnown RBP23.75■■□□□ 1.39
HOXC13-201ENST00000243056 UVSSAQ2YD98 709 aa23.75■■□□□ 1.39
HOXC13-201ENST00000243056 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
HOXC13-201ENST00000243056 MARCH10Q8NA82 808 aaPredicted RBP23.75■■□□□ 1.39
HOXC13-201ENST00000243056 ASAP1Q9ULH1 1129 aa23.75■■□□□ 1.39
HOXC13-201ENST00000243056 KDM3BQ7LBC6 1761 aa23.75■■□□□ 1.39
HOXC13-201ENST00000243056 PIGBQ92521 554 aa23.74■■□□□ 1.39
HOXC13-201ENST00000243056 ADAMTS7Q9UKP4 1686 aa23.74■■□□□ 1.39
HOXC13-201ENST00000243056 AFF2P51816 1311 aa23.74■■□□□ 1.39
HOXC13-201ENST00000243056 FLIIQ13045 1269 aa23.73■■□□□ 1.39
HOXC13-201ENST00000243056 SIPA1L3O60292 1781 aaPredicted RBP23.73■■□□□ 1.39
HOXC13-201ENST00000243056 DHX37Q8IY37 1157 aaKnown RBP23.72■■□□□ 1.39
HOXC13-201ENST00000243056 RGS12O14924 1447 aa23.72■■□□□ 1.39
HOXC13-201ENST00000243056 MYL6BP14649 208 aa23.72■■□□□ 1.39
HOXC13-201ENST00000243056 MMP14P50281 582 aa23.72■■□□□ 1.39
HOXC13-201ENST00000243056 ST7Q9NRC1 585 aa23.72■■□□□ 1.39
HOXC13-201ENST00000243056 TMOD3Q9NYL9 352 aa23.72■■□□□ 1.39
HOXC13-201ENST00000243056 DDX19BQ9UMR2 479 aa23.72■■□□□ 1.39
HOXC13-201ENST00000243056 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
HOXC13-201ENST00000243056 VPS72Q15906 364 aa23.71■■□□□ 1.39
HOXC13-201ENST00000243056 FAM184AQ8NB25 1140 aa23.71■■□□□ 1.39
HOXC13-201ENST00000243056 YY1AP1Q9H869 796 aa23.71■■□□□ 1.39
HOXC13-201ENST00000243056 AIMP1Q12904 312 aaKnown RBP23.7■■□□□ 1.38
HOXC13-201ENST00000243056 ARHGAP45Q92619 1136 aa23.7■■□□□ 1.38
HOXC13-201ENST00000243056 HEG1Q9ULI3 1381 aa23.7■■□□□ 1.38
HOXC13-201ENST00000243056 ABCC4O15439 1325 aa23.7■■□□□ 1.38
HOXC13-201ENST00000243056 HNRNPH2P55795 449 aaKnown RBP23.69■■□□□ 1.38
HOXC13-201ENST00000243056 FAM53CQ9NYF3 392 aa23.69■■□□□ 1.38
HOXC13-201ENST00000243056 KCNQ2O43526 872 aa23.69■■□□□ 1.38
HOXC13-201ENST00000243056 TOGARAM1Q9Y4F4 1720 aa23.69■■□□□ 1.38
HOXC13-201ENST00000243056 PSEN1P49768 467 aa23.68■■□□□ 1.38
HOXC13-201ENST00000243056 PTF1AQ7RTS3 328 aa23.68■■□□□ 1.38
HOXC13-201ENST00000243056 API5Q9BZZ5 524 aaKnown RBP23.68■■□□□ 1.38
HOXC13-201ENST00000243056 THRAP3Q9Y2W1 955 aaKnown RBP23.68■■□□□ 1.38
HOXC13-201ENST00000243056 RAD51AP2Q09MP3 1159 aa23.68■■□□□ 1.38
HOXC13-201ENST00000243056 ZBTB40Q9NUA8 1239 aa23.68■■□□□ 1.38
HOXC13-201ENST00000243056 ZBTB7BO15156 539 aaPredicted RBP23.67■■□□□ 1.38
HOXC13-201ENST00000243056 SYAP1Q96A49 352 aaPredicted RBP23.67■■□□□ 1.38
HOXC13-201ENST00000243056 FMNL2Q96PY5 1086 aa23.67■■□□□ 1.38
HOXC13-201ENST00000243056 GEMIN8Q9NWZ8 242 aaKnown RBP23.67■■□□□ 1.38
HOXC13-201ENST00000243056 PDIA6Q15084 440 aa23.67■■□□□ 1.38
HOXC13-201ENST00000243056 EFCC1Q9HA90 598 aa23.67■■□□□ 1.38
HOXC13-201ENST00000243056 MRC1P22897 1456 aa23.66■■□□□ 1.38
HOXC13-201ENST00000243056 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
HOXC13-201ENST00000243056 BARGINQ6ZT62 677 aa23.66■■□□□ 1.38
HOXC13-201ENST00000243056 AP5Z1O43299 807 aa23.65■■□□□ 1.38
HOXC13-201ENST00000243056 TNS2Q63HR2 1409 aa23.65■■□□□ 1.38
HOXC13-201ENST00000243056 SMTNL1A8MU46 457 aa23.65■■□□□ 1.38
HOXC13-201ENST00000243056 GADD45BO75293 160 aaPredicted RBP23.65■■□□□ 1.38
HOXC13-201ENST00000243056 SNRPA1P09661 255 aaKnown RBP23.65■■□□□ 1.38
HOXC13-201ENST00000243056 ATG3Q9NT62 314 aa23.65■■□□□ 1.38
HOXC13-201ENST00000243056 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
HOXC13-201ENST00000243056 CDC45O75419 566 aa23.64■■□□□ 1.38
HOXC13-201ENST00000243056 KMT5BQ4FZB7 885 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms