RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
SCNN1A-201ENST00000228916 NPHP3Q7Z494 1330 aa16.6■□□□□ 0.25
SCNN1A-201ENST00000228916 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 PAXBP1Q9Y5B6 917 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 TNNT1P13805 278 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 FAM173BQ6P4H8 233 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 CLSTN2Q9H4D0 955 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 NLRP6P59044 892 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 BEND3Q5T5X7 828 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 FERMT3Q86UX7 667 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
SCNN1A-201ENST00000228916 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
SCNN1A-201ENST00000228916 TRIM5Q9C035 493 aa16.58■□□□□ 0.24
SCNN1A-201ENST00000228916 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.24
SCNN1A-201ENST00000228916 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
SCNN1A-201ENST00000228916 MTX1Q13505 466 aa16.58■□□□□ 0.24
SCNN1A-201ENST00000228916 DRC7Q8IY82 874 aa16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 CLASRPQ8N2M8 674 aaKnown RBP16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 MAP4K1Q92918 833 aa16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 LTV1Q96GA3 475 aaPredicted RBP16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 PODXL2Q9NZ53 605 aa16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
SCNN1A-201ENST00000228916 CDC25BP30305 580 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 EVI5LQ96CN4 794 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 DIP2AQ14689 1571 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 CACTINQ8WUQ7 758 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 SPATA32Q96LK8 384 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 ALDH8A1Q9H2A2 487 aaPredicted RBP16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 PSMA5P28066 241 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 GABPB1Q06547 395 aaPredicted RBP16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 CCDC112Q8NEF3 446 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
SCNN1A-201ENST00000228916 GOLGA6L4A6NEF3 574 aa16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 ZNF165P49910 485 aa16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 COL9A3Q14050 684 aaPredicted RBP16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 SLC27A2O14975 620 aa16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 CAVIN2O95810 425 aa16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 OS9Q13438 667 aaPredicted RBP16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
SCNN1A-201ENST00000228916 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 NR1I2O75469 434 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 CCDC144CPQ8IYA2 1237 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 TFIP11Q9UBB9 837 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-201ENST00000228916 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 NAA30Q147X3 362 aaPredicted RBP16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 SARM1Q6SZW1 724 aa16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 HIP1O00291 1037 aa16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 HOXB7P09629 217 aa16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 TPD52L1Q16890 204 aaPredicted RBP16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
SCNN1A-201ENST00000228916 IGSF3O75054 1194 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 ANXA1P04083 346 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 IFIT2P09913 472 aaKnown RBP16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 KCNJ4P48050 445 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 TOB2Q14106 344 aaPredicted RBP16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
SCNN1A-201ENST00000228916 ADCY9O60503 1353 aa16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 TAF3Q5VWG9 929 aa16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 CEP135Q66GS9 1140 aa16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 KIF18AQ8NI77 898 aa16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 LGR6Q9HBX8 967 aa16.52■□□□□ 0.23
SCNN1A-201ENST00000228916 IQCB1Q15051 598 aa16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 LRRC8AQ8IWT6 810 aa16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 KCNQ3O43525 872 aa16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 NEMFO60524 1076 aa16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 CEBPAP49715 358 aaPredicted RBP16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
SCNN1A-201ENST00000228916 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 NYAP1Q6ZVC0 841 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 SLFN14P0C7P3 912 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 JCADQ9P266 1359 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 351.1 ms