RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ANKRD24Q8TF21 1146 aa15.25■□□□□ 0.03
COL1A1-201ENST00000225964 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
COL1A1-201ENST00000225964 URI1O94763 535 aaPredicted RBP15.24■□□□□ 0.03
COL1A1-201ENST00000225964 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
COL1A1-201ENST00000225964 SYNCQ9H7C4 482 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 MICU3Q86XE3 530 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 TAOK3Q9H2K8 898 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 TBCAO75347 108 aaKnown RBP15.24■□□□□ 0.03
COL1A1-201ENST00000225964 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 ALS2CR12Q96Q35 445 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
COL1A1-201ENST00000225964 ISM2Q6H9L7 571 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 FAM114A1Q8IWE2 563 aa15.24■□□□□ 0.03
COL1A1-201ENST00000225964 BIN1O00499 593 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 UTP14AQ9BVJ6 771 aaKnown RBP15.23■□□□□ 0.03
COL1A1-201ENST00000225964 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 MCM3P25205 808 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
COL1A1-201ENST00000225964 SETDB2Q96T68 719 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 GJB2P29033 226 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 MCM4P33991 863 aa15.23■□□□□ 0.03
COL1A1-201ENST00000225964 PPFIA3O75145 1194 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 EXOC1Q9NV70 894 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 ADGRL1O94910 1474 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 PTPRCP08575 1304 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
COL1A1-201ENST00000225964 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL1A1-201ENST00000225964 UBE3BQ7Z3V4 1068 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 LIMCH1Q9UPQ0 1083 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 NCOA7Q8NI08 942 aa15.22■□□□□ 0.03
COL1A1-201ENST00000225964 CTAGE5O15320 804 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 FERP16591 822 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 FLIIQ13045 1269 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 C8orf37Q96NL8 207 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 TIAM1Q13009 1591 aa15.21■□□□□ 0.03
COL1A1-201ENST00000225964 SMC1AQ14683 1233 aaKnown RBP15.21■□□□□ 0.03
COL1A1-201ENST00000225964 PHACTR2O75167 634 aa15.21■□□□□ 0.02
COL1A1-201ENST00000225964 STX8Q9UNK0 236 aa15.21■□□□□ 0.02
COL1A1-201ENST00000225964 UBA7P41226 1012 aa15.21■□□□□ 0.02
COL1A1-201ENST00000225964 RBM26Q5T8P6 1007 aaKnown RBP15.21■□□□□ 0.02
COL1A1-201ENST00000225964 TBC1D5Q92609 795 aa15.21■□□□□ 0.02
COL1A1-201ENST00000225964 ABCC11Q96J66 1382 aa15.21■□□□□ 0.02
COL1A1-201ENST00000225964 STX6O43752 255 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 TMC6Q7Z403 805 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 HEATR3Q7Z4Q2 680 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 TRMT1Q9NXH9 659 aaKnown RBP15.2■□□□□ 0.02
COL1A1-201ENST00000225964 CYP7A1P22680 504 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
COL1A1-201ENST00000225964 LRRC27Q9C0I9 530 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 VEZTQ9HBM0 779 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 NKTRP30414 1462 aaKnown RBP15.2■□□□□ 0.02
COL1A1-201ENST00000225964 PPM1EQ8WY54 764 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 CAMSAP2Q08AD1 1489 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 RGS22Q8NE09 1264 aa15.2■□□□□ 0.02
COL1A1-201ENST00000225964 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 PUS7Q96PZ0 661 aaKnown RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 SLC4A4Q9Y6R1 1079 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 MSH6P52701 1360 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 ERMNQ8TAM6 284 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 IQSEC3Q9UPP2 1182 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 TTC21BQ7Z4L5 1316 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 KIF2AO00139 706 aaPredicted RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 WTAPQ15007 396 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 LRRC45Q96CN5 670 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 NAA15Q9BXJ9 866 aaKnown RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 OTUD6BQ8N6M0 293 aa15.19■□□□□ 0.02
COL1A1-201ENST00000225964 TFIP11Q9UBB9 837 aaKnown RBP15.19■□□□□ 0.02
COL1A1-201ENST00000225964 FSD2A1L4K1 749 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 ARL1P40616 181 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-201ENST00000225964 RNF187Q5TA31 235 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-201ENST00000225964 DPH6Q7L8W6 267 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
COL1A1-201ENST00000225964 NEK1Q96PY6 1258 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 PYM1Q9BRP8 204 aaKnown RBP15.18■□□□□ 0.02
COL1A1-201ENST00000225964 ORC3Q9UBD5 711 aaPredicted RBP15.18■□□□□ 0.02
COL1A1-201ENST00000225964 PIK3R4Q99570 1358 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 ACTN2P35609 894 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 KIF18AQ8NI77 898 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 CALM1P0DP23 149 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 CALM2P0DP24 149 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 CALM3P0DP25 149 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 STX1AQ16623 288 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 PDCL2Q8N4E4 241 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 FAM212AQ96EL1 285 aa15.18■□□□□ 0.02
COL1A1-201ENST00000225964 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
COL1A1-201ENST00000225964 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms