RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NLRP10Q86W26 655 aa27.38■■□□□ 1.97
HOXC8-201ENST00000040584 HMMRO75330 724 aa27.37■■□□□ 1.97
HOXC8-201ENST00000040584 PPP1R42Q7Z4L9 355 aa27.37■■□□□ 1.97
HOXC8-201ENST00000040584 ZNF34Q8IZ26 560 aa27.37■■□□□ 1.97
HOXC8-201ENST00000040584 ARHGEF1Q92888 912 aaKnown RBP27.37■■□□□ 1.97
HOXC8-201ENST00000040584 GCC1Q96CN9 775 aa27.36■■□□□ 1.97
HOXC8-201ENST00000040584 BICC1Q9H694 974 aaKnown RBP27.36■■□□□ 1.97
HOXC8-201ENST00000040584 ANKRD36CQ5JPF3 1778 aa27.36■■□□□ 1.97
HOXC8-201ENST00000040584 UBN2Q6ZU65 1347 aa27.35■■□□□ 1.97
HOXC8-201ENST00000040584 EPHA10Q5JZY3 1008 aa27.35■■□□□ 1.97
HOXC8-201ENST00000040584 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
HOXC8-201ENST00000040584 DCTPP1Q9H773 170 aa27.35■■□□□ 1.97
HOXC8-201ENST00000040584 SRP68Q9UHB9 627 aaKnown RBP27.35■■□□□ 1.97
HOXC8-201ENST00000040584 NARFQ9UHQ1 456 aa27.35■■□□□ 1.97
HOXC8-201ENST00000040584 SRGAP3O43295 1099 aa27.34■■□□□ 1.97
HOXC8-201ENST00000040584 USPL1Q5W0Q7 1092 aa27.34■■□□□ 1.97
HOXC8-201ENST00000040584 PDZRN3Q9UPQ7 1066 aa27.34■■□□□ 1.97
HOXC8-201ENST00000040584 ZNF652Q9Y2D9 606 aa27.34■■□□□ 1.97
HOXC8-201ENST00000040584 BCORQ6W2J9 1755 aa27.33■■□□□ 1.97
HOXC8-201ENST00000040584 CLEC4GQ6UXB4 293 aa27.33■■□□□ 1.97
HOXC8-201ENST00000040584 SSH3Q8TE77 659 aa27.33■■□□□ 1.97
HOXC8-201ENST00000040584 FAM89AQ96GI7 184 aa27.33■■□□□ 1.97
HOXC8-201ENST00000040584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.32■■□□□ 1.96
HOXC8-201ENST00000040584 ZPR1O75312 459 aa27.32■■□□□ 1.96
HOXC8-201ENST00000040584 NBR1Q14596 966 aa27.32■■□□□ 1.96
HOXC8-201ENST00000040584 C8orf34Q49A92 452 aa27.32■■□□□ 1.96
HOXC8-201ENST00000040584 BCL2L12Q9HB09 334 aa27.32■■□□□ 1.96
HOXC8-201ENST00000040584 RFC4P35249 363 aa27.32■■□□□ 1.96
HOXC8-201ENST00000040584 EN1Q05925 392 aaPredicted RBP27.32■■□□□ 1.96
HOXC8-201ENST00000040584 MTX1Q13505 466 aa27.32■■□□□ 1.96
HOXC8-201ENST00000040584 ZBTB38Q8NAP3 1195 aaPredicted RBP27.32■■□□□ 1.96
HOXC8-201ENST00000040584 NIP7Q9Y221 180 aaKnown RBP eCLIP27.32■■□□□ 1.96
HOXC8-201ENST00000040584 PCCAP05165 728 aaPredicted RBP27.31■■□□□ 1.96
HOXC8-201ENST00000040584 HMGB2P26583 209 aaKnown RBP27.31■■□□□ 1.96
HOXC8-201ENST00000040584 POLA2Q14181 598 aa27.31■■□□□ 1.96
HOXC8-201ENST00000040584 UBR3Q6ZT12 1888 aa27.3■■□□□ 1.96
HOXC8-201ENST00000040584 NUCB1Q02818 461 aa27.3■■□□□ 1.96
HOXC8-201ENST00000040584 SYNE4Q8N205 404 aa27.3■■□□□ 1.96
HOXC8-201ENST00000040584 ADRA2BP18089 450 aa27.3■■□□□ 1.96
HOXC8-201ENST00000040584 EZH2Q15910 746 aaKnown RBP27.3■■□□□ 1.96
HOXC8-201ENST00000040584 SUSD4Q5VX71 490 aa27.3■■□□□ 1.96
HOXC8-201ENST00000040584 TRMT112Q9UI30 125 aaKnown RBP27.3■■□□□ 1.96
HOXC8-201ENST00000040584 SCN7AQ01118 1682 aa27.29■■□□□ 1.96
HOXC8-201ENST00000040584 ZNF827Q17R98 1081 aa27.29■■□□□ 1.96
HOXC8-201ENST00000040584 ANKRD45Q5TZF3 282 aa27.29■■□□□ 1.96
HOXC8-201ENST00000040584 CAMKK2Q96RR4 588 aa27.29■■□□□ 1.96
HOXC8-201ENST00000040584 FAM177BA6PVY3 158 aa27.28■■□□□ 1.96
HOXC8-201ENST00000040584 FOXO4P98177 505 aa27.28■■□□□ 1.96
HOXC8-201ENST00000040584 RGPD3A6NKT7 1758 aaPredicted RBP27.28■■□□□ 1.96
HOXC8-201ENST00000040584 RGPD4Q7Z3J3 1758 aa27.28■■□□□ 1.96
HOXC8-201ENST00000040584 USP42Q9H9J4 1324 aaKnown RBP27.28■■□□□ 1.96
HOXC8-201ENST00000040584 C4AP0C0L4 1744 aa27.28■■□□□ 1.96
HOXC8-201ENST00000040584 RGL2O15211 777 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 SSFA2P28290 1259 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 PARP10Q53GL7 1025 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 AKT1S1Q96B36 256 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 DAXXQ9UER7 740 aaPredicted RBP27.27■■□□□ 1.96
HOXC8-201ENST00000040584 EXOC6BQ9Y2D4 811 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 APBB1O00213 710 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 SF3B2Q13435 895 aaKnown RBP27.27■■□□□ 1.96
HOXC8-201ENST00000040584 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
HOXC8-201ENST00000040584 TBC1D9BQ66K14 1250 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 BICDL1Q6ZP65 573 aa27.27■■□□□ 1.96
HOXC8-201ENST00000040584 RGS3P49796 1198 aa27.26■■□□□ 1.95
HOXC8-201ENST00000040584 TFCP2L1Q9NZI6 479 aa27.26■■□□□ 1.95
HOXC8-201ENST00000040584 DEKP35659 375 aaKnown RBP27.25■■□□□ 1.95
HOXC8-201ENST00000040584 LMBR1LQ6UX01 489 aa27.25■■□□□ 1.95
HOXC8-201ENST00000040584 CHD1LQ86WJ1 897 aa27.25■■□□□ 1.95
HOXC8-201ENST00000040584 UTP14AQ9BVJ6 771 aaKnown RBP27.25■■□□□ 1.95
HOXC8-201ENST00000040584 LNPKQ9C0E8 428 aa27.25■■□□□ 1.95
HOXC8-201ENST00000040584 CDHR2Q9BYE9 1310 aa27.24■■□□□ 1.95
HOXC8-201ENST00000040584 SURF6O75683 361 aaKnown RBP27.23■■□□□ 1.95
HOXC8-201ENST00000040584 DEFB132Q7Z7B7 95 aa27.23■■□□□ 1.95
HOXC8-201ENST00000040584 IRS4O14654 1257 aaPredicted RBP27.23■■□□□ 1.95
HOXC8-201ENST00000040584 PA2G4Q9UQ80 394 aaKnown RBP27.23■■□□□ 1.95
HOXC8-201ENST00000040584 CHMP3Q9Y3E7 222 aa27.23■■□□□ 1.95
HOXC8-201ENST00000040584 NTSR2O95665 410 aa27.22■■□□□ 1.95
HOXC8-201ENST00000040584 BAG6P46379 1132 aa27.22■■□□□ 1.95
HOXC8-201ENST00000040584 PLA2G12BQ9BX93 195 aa27.22■■□□□ 1.95
HOXC8-201ENST00000040584 SH3TC1Q8TE82 1336 aa27.21■■□□□ 1.95
HOXC8-201ENST00000040584 BCL11AQ9H165 835 aa27.21■■□□□ 1.95
HOXC8-201ENST00000040584 SETDB2Q96T68 719 aa27.21■■□□□ 1.95
HOXC8-201ENST00000040584 SMARCA5O60264 1052 aaPredicted RBP27.2■■□□□ 1.94
HOXC8-201ENST00000040584 NUTM1Q86Y26 1132 aa27.2■■□□□ 1.94
HOXC8-201ENST00000040584 KLHDC4Q8TBB5 520 aa27.2■■□□□ 1.94
HOXC8-201ENST00000040584 GYS1P13807 737 aa27.19■■□□□ 1.94
HOXC8-201ENST00000040584 RFX5P48382 616 aaPredicted RBP27.19■■□□□ 1.94
HOXC8-201ENST00000040584 HCLS1P14317 486 aaPredicted RBP27.18■■□□□ 1.94
HOXC8-201ENST00000040584 CCDC85AQ96PX6 553 aaPredicted RBP27.18■■□□□ 1.94
HOXC8-201ENST00000040584 COL23A1Q86Y22 540 aaPredicted RBP27.17■■□□□ 1.94
HOXC8-201ENST00000040584 ANO8Q9HCE9 1232 aaPredicted RBP27.17■■□□□ 1.94
HOXC8-201ENST00000040584 PDE8AO60658 829 aa27.17■■□□□ 1.94
HOXC8-201ENST00000040584 TUBGCP6Q96RT7 1819 aa27.16■■□□□ 1.94
HOXC8-201ENST00000040584 RAB11FIP3O75154 756 aa27.16■■□□□ 1.94
HOXC8-201ENST00000040584 CSF1RP07333 972 aa27.16■■□□□ 1.94
HOXC8-201ENST00000040584 LRRCC1Q9C099 1032 aa27.16■■□□□ 1.94
HOXC8-201ENST00000040584 SIL1Q9H173 461 aa27.16■■□□□ 1.94
HOXC8-201ENST00000040584 CTSWP56202 376 aa27.15■■□□□ 1.94
HOXC8-201ENST00000040584 PTPN12Q05209 780 aaKnown RBP27.15■■□□□ 1.94
HOXC8-201ENST00000040584 OS9Q13438 667 aaPredicted RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms