RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Rfx1P48377 963 aa9.72□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 Rnf20Q5DTM8 973 aa9.72□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 Gtdc1Q8BW56 445 aa9.72□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 C1qtnf2Q9D8U4 294 aa9.72□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 Smg6P61406 1418 aaKnown RBP9.72□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 MaddQ80U28 1577 aa9.71□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 Usp32F8VPZ3 1604 aa9.71□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 D430041D05RikF6ZGR6 1678 aa9.71□□□□□ -0.85
Ccdc47-202ENSMUST00000106865 Tbx1P70323 479 aa9.71□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Cyp4x1Q6A152 507 aa9.71□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Znf316Q6PGE4 1016 aa9.71□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Ripk4Q9ERK0 786 aa9.71□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Ppip5k1A2ARP1 1436 aa9.71□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Ly75Q60767 1723 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Map3k13Q1HKZ5 959 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Sgsm1Q8BPQ7 1093 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Phka2Q8BWJ3 1235 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Snapc1Q8K0S9 389 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Plcd4Q8K3R3 807 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Traf7Q922B6 594 aa9.7□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Rhox1B1APN4 224 aa9.69□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Gm11555B1AQ89 175 aa9.69□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Tlr7P58681 1050 aa9.69□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Zbtb33Q8BN78 671 aa9.69□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 ParnQ8VDG3 624 aa9.69□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Atp7bQ64446 1462 aa9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Bmp1P98063 991 aa9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Abtb2Q7TQI7 1024 aa9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Cwc22Q8C5N3 908 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Sumf1Q8R0F3 372 aa9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Rpa1Q8VEE4 623 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Cap2Q9CYT6 476 aa9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 HnrnpmQ9D0E1 729 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Add1Q9QYC0 735 aaKnown RBP9.68□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Kif1aP33173 1695 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Cd109Q8R422 1442 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Gm11758A2BEI6 360 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Gm11757A2BEI8 360 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Erich6D3Z6S9 713 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 InhbeO08717 350 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Map4P27546 1125 aaKnown RBP9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 4930567H17RikQ3V0K5 233 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Plekhg5Q66T02 1073 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Ppp4r3bQ922R5 820 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Plxnc1Q9QZC2 1574 aa9.67□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Shank2Q80Z38 1476 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Nup155Q99P88 1391 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 PurbO35295 324 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 VegfbP49766 207 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Rapgefl1Q68EF8 662 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 ErfeQ6PGN1 340 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Cxxc1Q9CWW7 660 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Tgm5Q9D7I9 724 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Q9D9H8 365 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Mkrn1Q9QXP6 481 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Stau1Q9Z108 487 aaKnown RBP9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Abca15E9PWH4 1668 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 C5P06684 1680 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Rims1Q99NE5 1463 aa9.66□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Camta1A2A891 1682 aa9.65□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Xirp1O70373 1129 aa9.65□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Sytl5Q80T23 753 aa9.65□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Col26a1Q91VF6 440 aa9.65□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Ms4a4dQ99N05 225 aa9.65□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Wnt8bQ9WUD6 350 aa9.65□□□□□ -0.86
Ccdc47-202ENSMUST00000106865 Atp10bB1AWN4 1474 aa9.65□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Sall3Q62255 1320 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Ttll5Q8CHB8 1328 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Irgm2A0A140LIF8 407 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 PtprcP06800 1291 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Hcls1P49710 486 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Card10P58660 1021 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 CalcaP70160 136 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Kcna6Q61923 529 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Phf20l1Q8CCJ9 1013 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Ppm1fQ8CGA0 452 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Pcdhb2Q91Y00 799 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Lrrc59Q922Q8 307 aaKnown RBP9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Bap1Q99PU7 728 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Clstn2Q9ER65 966 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Pola1P33609 1465 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Als2Q920R0 1651 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 ErbinQ80TH2 1402 aa9.64□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Kat6aQ8BZ21 2003 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Zfp644E9QA22 1323 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Kcng1A2BDX4 514 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Ap1g2O88512 791 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Magea1O89006 320 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Kcna3P16390 528 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Bmp2P21274 394 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Farp2Q91VS8 1065 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Rbck1Q9WUB0 508 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Nup153E9Q3G8 1462 aaKnown RBP9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Cacna1sQ02789 1880 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 AatkQ80YE4 1365 aa9.63□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Epha4Q03137 986 aa9.62□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Olfr761Q7TRJ0 323 aa9.62□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Sugp2Q8CH09 1067 aa9.62□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Acsbg1Q99PU5 721 aa9.62□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Psrc1Q9D0P7 329 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms