RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tsen2Q6P7W5 460 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Hook3Q8BUK6 718 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Filip1lQ6P6L0 1131 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Mettl24Q8CCB5 363 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Abcd1P48410 736 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ccdc162pQ0VG85 912 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Krt12Q64291 487 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Wwc2Q6NXJ0 1187 aa10.33□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Nup62clA2AG10 272 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 ItkQ03526 625 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Krt17Q9QWL7 433 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Drc1Q3USS3 753 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Cd53Q61451 219 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Trim25Q61510 634 aaKnown RBP10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Itpripl1A2ASA8 547 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tnni3kQ5GIG6 834 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 St7Q99M96 577 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tcea2Q9QVN7 299 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tsta3P23591 321 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Zpr1Q62384 459 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 ChpfQ6IQX7 774 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 4921530L21RikQ9CQ47 274 aa10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Serbp1Q9CY58 407 aaKnown RBP10.32□□□□□ -0.76
Clcn3-202ENSMUST00000056508 DstykQ6XUX1 927 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ccdc130Q9D516 385 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tnip1Q9WUU8 647 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Gm3147A0A0J9YU88 481 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Gm10424A0A0J9YVD0 481 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Znf335A2A5K6 1337 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Gm7971J3QMM8 481 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Mknk1O08605 427 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 BC061212Q6P8K3 481 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 A430089I19RikQ8C9W1 407 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 LdhbP16125 334 aaKnown RBP10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Map10Q8BJS7 891 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Wbp11Q923D5 641 aaKnown RBP10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Magea3Q6T340 320 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Eno4Q8C042 619 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Lonp1Q8CGK3 949 aaKnown RBP10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Rabgap1A2AWA9 1064 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Elmsan1E9Q2I4 1089 aaKnown RBP10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Speer2E9Q9U2 264 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Trim38Q5SZ99 471 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tpd52Q62393 224 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Smc6Q924W5 1097 aa10.31□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Scaf8Q6DID3 1268 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Cep57Q8CEE0 500 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ccdc89Q9DA73 370 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Rnf40Q3U319 1001 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Pdap1Q3UHX2 181 aaKnown RBP10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ccdc57Q6PHN1 1016 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ahi1Q8K3E5 1047 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ddx56Q9D0R4 546 aaKnown RBP10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 WtapQ9ER69 396 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Parp2O88554 559 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tbc1d10bQ8BHL3 798 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Spag16Q8K450 639 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Hs2st1Q8R3H7 356 aa10.3□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Nlrp4eQ66X19 978 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ttc8Q8VD72 515 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Rai14Q9EP71 979 aaKnown RBP10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Cabp2Q9JLK4 216 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Kdelc2G5E897 503 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Nlrp2Q4PLS0 1046 aaKnown RBP10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 2900092C05RikQ5I0V9 184 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Ccdc150Q8CDI7 1110 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 FanclQ9CR14 375 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Q9CR55 154 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Syce1Q9D495 329 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Eif2ak1Q9Z2R9 619 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Myo1bP46735 1107 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tspan18Q80WR1 248 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tmem87aQ8BXN9 555 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 PpcsQ8VDG5 311 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Sbk3P0C5K0 361 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Uimc1Q5U5Q9 727 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Sbno2Q7TNB8 1349 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Diaph2O70566 1098 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Kif4P33174 1231 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Washc4Q3UMB9 1173 aa10.29□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Gm10073E9Q3T0 114 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Strip2Q8C9H6 844 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Pde6cQ91ZQ1 861 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Armc6Q8BNU0 468 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 SowahdQ8BY98 327 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Bicdl2Q8CHW5 507 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Unc45aQ99KD5 944 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Sart1Q9Z315 806 aaKnown RBP10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Fbf1A2A870 1173 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 P4hbP09103 509 aaKnown RBP10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Satb1Q60611 764 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Q8BZJ8 459 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Gucy2fQ5SDA5 1108 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Tpm4Q6IRU2 248 aa10.28□□□□□ -0.76
Clcn3-202ENSMUST00000056508 AmphQ7TQF7 686 aa10.27□□□□□ -0.76
Clcn3-202ENSMUST00000056508 DmgdhQ9DBT9 869 aa10.27□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Trim39Q9ESN2 488 aa10.27□□□□□ -0.76
Clcn3-202ENSMUST00000056508 Cfap70D3YVL2 1141 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Art2bO35975 289 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms