RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Col4a1P02463 1669 aa13.83□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Ttll7A4Q9F0 912 aa13.82□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Stox1B2RQL2 990 aa13.82□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Igfbp6P47880 238 aa13.82□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Irf9Q61179 399 aa13.82□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Gpr101Q80T62 511 aa13.82□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Cyp2d11P24457 504 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Nectin2P32507 530 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Mapk8ip1Q9WVI9 707 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Flt4P35917 1363 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Usp34Q6ZQ93 3582 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 PnnO35691 725 aaKnown RBP13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Lrch1P62046 709 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Aplp1Q03157 653 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Zc3h15Q3TIV5 426 aaKnown RBP13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Q3UPC7 1272 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Adam1aQ60813 791 aa13.81□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Zfp831A2ADM8 1628 aa13.8□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Disp3A3KFU9 1347 aa13.8□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Dctn1O08788 1281 aa13.8□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Adamts19P59509 1210 aa13.8□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Zbtb40Q6PCS8 1258 aa13.8□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Map3k9Q3U1V8 1077 aa13.79□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Scaf8Q6DID3 1268 aa13.79□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Ric3Q8BPM6 367 aa13.79□□□□□ -0.2
Tubb1-201ENSMUST00000016399 SowahdQ8BY98 327 aa13.79□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Aldh1l1Q8R0Y6 902 aa13.79□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Nlrp3Q8R4B8 1033 aa13.79□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Kif13bA0A286YCV9 1847 aa13.78□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Thsd7bQ6P4U0 1607 aa13.78□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Rangap1P46061 589 aaKnown RBP13.78□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Aifm3Q3TY86 605 aa13.78□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Zc3h12cQ5DTV4 884 aa13.78□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Bicc1Q99MQ1 977 aaKnown RBP13.78□□□□□ -0.2
Tubb1-201ENSMUST00000016399 Glt1d1A4FUP9 346 aa13.77□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Eif6O55135 245 aa13.77□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Zfp646Q6NV66 1788 aa13.77□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Fkbp1aP26883 108 aaKnown RBP13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Hspa8P63017 646 aaKnown RBP13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 HellsQ60848 821 aa13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Map3k2Q61083 619 aa13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Gimap8Q75N62 688 aa13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ppm1mQ8BU27 406 aa13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ssc5dQ8BV57 1371 aa13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ddx60E9PZQ1 1711 aa13.76□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Trim58Q5NCC9 485 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Tom1l2Q5SRX1 507 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 AbraQ8BUZ1 375 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Strip1Q8C079 837 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Angel2Q8K1C0 544 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Apbb1Q9QXJ1 710 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 MypnQ5DTJ9 1315 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Nup188Q6ZQH8 1759 aa13.75□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Mrc1Q61830 1456 aa13.74□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Atp6v0a2P15920 856 aa13.74□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ddx58Q6Q899 926 aa13.74□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Lama2Q60675 3118 aaKnown RBP13.74□□□□□ -0.21
Tubb1-201ENSMUST00000016399 AK157302I3ITR1 129 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Hspa2P17156 633 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Eva1cP58659 440 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Chrna5Q2MKA5 467 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Bend3Q6PAL0 825 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Atxn2lQ7TQH0 1049 aaKnown RBP13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Isca1Q9D924 129 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Dpp7Q9ET22 506 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Exoc6bA6H5Z3 810 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Map9Q3TRR0 646 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Insm1Q63ZV0 521 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Trim34aQ99PP6 485 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Klf15Q9EPW2 415 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Mkrn1Q9QXP6 481 aa13.73□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Sipa1l3G3X9J0 1776 aa13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Cct4P80315 539 aaKnown RBP13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ankib1Q6ZPS6 1085 aa13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Mphosph10Q810V0 681 aaKnown RBP13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Znf330Q922H9 316 aa13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ltb4r2Q9JJL9 360 aa13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Ripk3Q9QZL0 486 aa13.72□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Lama4P97927 1816 aa13.71□□□□□ -0.21
Tubb1-201ENSMUST00000016399 Npy5rO70342 466 aa13.71□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Rtkn2Q14B46 604 aa13.71□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Rbm17Q8JZX4 405 aaKnown RBP13.71□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Scn9aQ62205 1984 aa13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Glg1Q61543 1175 aaKnown RBP13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Fkbp5Q64378 456 aa13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Maco1Q7TQE6 664 aaKnown RBP13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Pank1Q8K4K6 548 aa13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Ehd4Q9EQP2 541 aa13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Cyp2ab1S4R196 498 aa13.7□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Myd88P22366 296 aa13.69□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Zap70P43404 618 aa13.69□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Evi5P97366 809 aa13.69□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Ripor2Q80U16 1078 aa13.69□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Nutm1Q8BHP2 1126 aa13.69□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Stard3nlQ9DCI3 235 aa13.69□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Mtcl1Q3UHU5 1945 aa13.68□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Mybbp1aQ7TPV4 1344 aaKnown RBP13.68□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Ankrd44B2RXR6 993 aa13.68□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Cfdp1O88271 295 aaKnown RBP13.68□□□□□ -0.22
Tubb1-201ENSMUST00000016399 Pou3f3P31361 497 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms