RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, human

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDRT1-208	ENST00000630868	HMGXB4	Q9UGU5	601 aa		4.16	□□□□□ -1.74
CDRT1-208	ENST00000630868	SUN2	Q9UH99	717 aa		4.16	□□□□□ -1.74
CDRT1-208	ENST00000630868	GGA2	Q9UJY4	613 aa		4.16	□□□□□ -1.74
CDRT1-208	ENST00000630868	NAALAD2	Q9Y3Q0	740 aa		4.16	□□□□□ -1.74
CDRT1-208	ENST00000630868	LRBA	P50851	2863 aa		4.16	□□□□□ -1.74
CDRT1-208	ENST00000630868	PRRC2C	Q9Y520	2896 aa	Known RBP	4.16	□□□□□ -1.74
CDRT1-208	ENST00000630868	TDRD6	O60522	2096 aa	Known RBP	4.15	□□□□□ -1.74
CDRT1-208	ENST00000630868	LY6G6E	A0A0G2JKS1	128 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	LRRIQ3	A6PVS8	624 aa	Predicted RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	OVOL3	O00110	214 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	MAGEC1	O60732	1142 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SERPINI2	O75830	405 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SMC2	O95347	1197 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	PIGN	O95427	931 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ADCY5	O95622	1261 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ASS1	P00966	412 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ITGB6	P18564	788 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	PAICS	P22234	425 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ADRA1A	P35348	466 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	AHR	P35869	848 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	NUDT1	P36639	197 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	KCNK10	P57789	538 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	RPS18	P62269	152 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	GBE1	Q04446	702 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	TRAP1	Q12931	704 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	TRAF3	Q13114	568 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SNX1	Q13596	522 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CUL2	Q13617	745 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	GTF2H2	Q13888	395 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CST6	Q15828	149 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SGSM1	Q2NKQ1	1148 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	PRTG	Q2VWP7	1150 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	KRTAP19-4	Q3LI73	84 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ADPRM	Q3LIE5	342 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CMPK2	Q5EBM0	449 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CFAP157	Q5JU67	520 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	C9orf64	Q5T6V5	341 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	GTF2H2C	Q6P1K8	395 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	FAM159A	Q6UWV7	190 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	KDM7A	Q6ZMT4	941 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	BHLHA9	Q7RTU4	235 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	C5orf24	Q7Z6I8	188 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	PRUNE1	Q86TP1	453 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ZDHHC21	Q8IVQ6	265 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	GPALPP1	Q8IXQ4	340 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CCDC65	Q8IXS2	484 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CENPL	Q8N0S6	344 aa	Predicted RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ARHGAP18	Q8N392	663 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SLC25A45	Q8N413	288 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	OR4C6	Q8NH72	309 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	WFDC5	Q8TCV5	224 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	DDI1	Q8WTU0	396 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	MCHR2	Q969V1	340 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	AZIN2	Q96A70	460 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CCDC127	Q96BQ5	260 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	TMA16	Q96EY4	203 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SCMH1	Q96GD3	660 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	THOC3	Q96J01	351 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	SERAC1	Q96JX3	654 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	GSDMA	Q96QA5	445 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	DUSP16	Q9BY84	665 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	UBXN6	Q9BZV1	441 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	NEUROG2	Q9H2A3	272 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	FARSB	Q9NSD9	589 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ACOXL	Q9NUZ1	547 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	ZNF224	Q9NZL3	707 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	PTBP2	Q9UKA9	531 aa	Known RBP	4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	NCKAP1	Q9Y2A7	1128 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868		U3KQA8	63 aa		4.15	□□□□□ -1.75
CDRT1-208	ENST00000630868	CACNA1D	Q01668	2161 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	UNC13C	Q8NB66	2214 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	CELSR2	Q9HCU4	2923 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	IGLV5-39	A0A0G2JS06	123 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	FAM47DP	A6NHR8	397 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	ZSCAN5B	A6NJL1	495 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	ZNF587B	E7ETH6	402 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	GOLGA6L19	H0YKK7	550 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	DYNC1I1	O14576	645 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	TNFRSF13B	O14836	293 aa	Predicted RBP	4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	MAGEB3	O15480	346 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	POLR2D	O15514	142 aa	Known RBP	4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	NME2P1	O60361	137 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	SYNGR4	O95473	234 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	IGLV3-27	P01718	113 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	APOH	P02749	345 aa	Predicted RBP	4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	SFTPB	P07988	381 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	GP1BB	P13224	206 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	EZR	P15311	586 aa	Known RBP	4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	CDH3	P22223	829 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	ADORA2B	P29275	332 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	CD70	P32970	193 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	SFTPD	P35247	375 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	DRD3	P35462	400 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	RFX2	P48378	723 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	CASP4	P49662	377 aa		4.14	□□□□□ -1.75
CDRT1-208	ENST00000630868	PEX5	P50542	639 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms