RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 STK38Q15208 465 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 USF2Q15853 346 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 ITPRIPL2Q3MIP1 535 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 HSDL1Q3SXM5 330 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 SLC25A53Q5H9E4 307 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 C6orf226Q5I0X4 101 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 LIPJQ5W064 366 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 PAPD7Q5XG87 772 aaKnown RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 SLC25A25Q6KCM7 469 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 TMEM220Q6QAJ8 160 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 LINGO4Q6UY18 593 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 ZNF793Q6ZN11 406 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 ZNF367Q7RTV3 350 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 DEFB128Q7Z7B8 93 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 FAM58AQ8N1B3 248 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 PYROXD2Q8N2H3 581 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 RNF149Q8NC42 400 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 NOA1Q8NC60 698 aaKnown RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 NPEPL1Q8NDH3 523 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 FAM83FQ8NEG4 500 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 OR5AU1Q8NGC0 362 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 OR6M1Q8NGM8 313 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 C16orf52Q8NHV5 167 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 ANGPTL6Q8NI99 470 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 NDNFQ8TB73 568 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 CCDC12Q8WUD4 166 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 SEPT8Q92599 483 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 P3H4Q92791 437 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 TOP1MTQ969P6 601 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 TMEM19Q96HH6 336 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 INPP4AQ96PE3 977 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 DUX5Q96PT3 197 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 KRT12Q99456 494 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 CDX2Q99626 313 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 FRMD8P1Q9BZ68 369 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 RHBGQ9H310 441 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 FAM124BQ9H5Z6 455 aaPredicted RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 PSTPIP2Q9H939 334 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 ANKRA2Q9H9E1 313 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 PCDH9Q9HC56 1237 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 MCCC2Q9HCC0 563 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 NRBP2Q9NSY0 501 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 MAN2C1Q9NTJ4 1040 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 TMEM45AQ9NWC5 275 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 ADAM28Q9UKQ2 775 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 ZNF346Q9UL40 294 aaKnown RBP5.42□□□□□ -1.54
MRE11-209ENST00000540013 RPH3ALQ9UNE2 315 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 LAMP3Q9UQV4 416 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 WDR45Q9Y484 360 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 UNC80Q8N2C7 3258 aa5.42□□□□□ -1.54
MRE11-209ENST00000540013 CHD9Q3L8U1 2897 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 TTC3P53804 2025 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 KLF18A0A0U1RQI7 1052 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 CCDC162PA2VCL2 907 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 TLX3O43711 291 aaPredicted RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 MBP02144 154 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 LGALS2P05162 132 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 GSTA2P09210 222 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 ANXA4P09525 319 aaPredicted RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 FCGR1AP12314 374 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 NKX2-1P43699 371 aaPredicted RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 TPMTP51580 245 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 VAMP7P51809 220 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 CCNG1P51959 295 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 CDH12P55289 794 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 HNRNPH2P55795 449 aaKnown RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 PPIAP62937 165 aaKnown RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 HEPACAMQ14CZ8 416 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 SPHARQ15513 63 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 SYPL1Q16563 259 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 UBE2SQ16763 222 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 SGSM1Q2NKQ1 1148 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 Q4G0T1 1027 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 HSP90AA4PQ58FG1 418 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 TMEM71Q6P5X7 295 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 TTC23LQ6PF05 361 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 TMEM107Q6UX40 140 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 METTL7BQ6UX53 244 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 COLCA1Q6ZS62 124 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 CYP4V2Q6ZWL3 525 aaPredicted RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 Q75L30 129 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 SSX9Q7RTT3 188 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 GOLGA7Q7Z5G4 137 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 PRUNE1Q86TP1 453 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 CCDC65Q8IXS2 484 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 MMD2Q8IY49 270 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 SLC7A5P1Q8MH63 180 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 TMEM123Q8N131 208 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 DDHD1Q8NEL9 900 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 OR4L1Q8NH43 312 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 OR52I2Q8NH67 350 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 THAP6Q8TBB0 222 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 ZNF596Q8TC21 504 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 ST8SIA1Q92185 356 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 ELMO1Q92556 727 aa5.41□□□□□ -1.54
MRE11-209ENST00000540013 RPL3LQ92901 407 aaKnown RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 DAZLQ92904 295 aaKnown RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 TSACCQ96A04 125 aaPredicted RBP5.41□□□□□ -1.54
MRE11-209ENST00000540013 SLC25A36Q96CQ1 311 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms