RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	HNF1A	P20823	631 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	UQCRC2	P22695	453 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	IGFBP5	P24593	272 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	CDH5	P33151	784 aa	Predicted RBP	3.14	□□□□□ -1.91
RDX-208	ENST00000530085	RPL4	P36578	427 aa	Known RBP	3.14	□□□□□ -1.91
RDX-208	ENST00000530085	MAGEA5	P43359	124 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	NOVA1	P51513	510 aa	Known RBP	3.14	□□□□□ -1.91
RDX-208	ENST00000530085	PLA2G16	P53816	162 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	PLOD1	Q02809	727 aa	Predicted RBP	3.14	□□□□□ -1.91
RDX-208	ENST00000530085	SYPL1	Q16563	259 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	NHLRC3	Q5JS37	347 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	CENPP	Q6IPU0	288 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	SCYL2	Q6P3W7	929 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	PAQR6	Q6TCH4	344 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	GPRIN3	Q6ZVF9	776 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	ERICH1	Q86X53	443 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	ITLN1	Q8WWA0	313 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF689	Q96CS4	500 aa	Predicted RBP	3.14	□□□□□ -1.91
RDX-208	ENST00000530085	OMD	Q99983	421 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	RBM4B	Q9BQ04	359 aa	Known RBP	3.14	□□□□□ -1.91
RDX-208	ENST00000530085	ELOVL3	Q9HB03	270 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	ELOVL2	Q9NXB9	296 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	RNF14	Q9UBS8	474 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	ANAPC7	Q9UJX3	599 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	NTNG1	Q9Y2I2	539 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	WDR45	Q9Y484	360 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	STYXL1	Q9Y6J8	313 aa		3.14	□□□□□ -1.91
RDX-208	ENST00000530085	USP6	P35125	1406 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	KRTAP16-1	A8MUX0	517 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF487	B1APH4	448 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	LRRTM2	O43300	516 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	LCMT2	O60294	686 aa	Known RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	GALR3	O60755	368 aa	Predicted RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	TRIM3	O75382	744 aa	Predicted RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	IGHV3-13	P01766	116 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	HBQ1	P09105	142 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	SDC1	P18827	310 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	TPSB2	P20231	275 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	PTGER3	P43115	390 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	BDKRB1	P46663	353 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	UBE2H	P62256	183 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	MS4A2	Q01362	244 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	CSTF1	Q05048	431 aa	Known RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	IL18R1	Q13478	541 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	FCN2	Q15485	313 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	TPSAB1	Q15661	275 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	LTB4R	Q15722	352 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	MICA	Q29983	383 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	SNAI3	Q3KNW1	292 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	LGSN	Q5TDP6	509 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	TMEM17	Q86X19	198 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	LRRC43	Q8N309	656 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	ZCCHC7	Q8N3Z6	543 aa	Known RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	BPIFB2	Q8N4F0	458 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	ANKFN1	Q8N957	763 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	C17orf47	Q8NEP4	570 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF671	Q8TAW3	534 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	CNIH3	Q8TBE1	160 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	N4BP2L2	Q92802	583 aa	Predicted RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	RPL3L	Q92901	407 aa	Known RBP	3.13	□□□□□ -1.91
RDX-208	ENST00000530085	PSMB7	Q99436	277 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	ZBP1	Q9H171	429 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	CRLS1	Q9UJA2	301 aa		3.13	□□□□□ -1.91
RDX-208	ENST00000530085	EFNA2	O43921	213 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	SNN	O75324	88 aa	Predicted RBP	3.12	□□□□□ -1.91
RDX-208	ENST00000530085	VENTX	O95231	258 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	OPN1MW	P04001	364 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	SERPINB2	P05120	415 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	HOXD4	P09016	255 aa	Predicted RBP	3.12	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF883	P0CG24	379 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	OPN1MW2	P0DN77	364 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	OPN1MW3	P0DN78	364 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	TBXA2R	P21731	343 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	HMGCL	P35914	325 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	OR1D4	P47884	311 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	ARHGDIB	P52566	201 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	BDH1	Q02338	343 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	RGS1	Q08116	209 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	IL24	Q13007	206 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	RIPK1	Q13546	671 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	CRMP1	Q14194	572 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	CYP51A1	Q16850	503 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	MAJIN	Q3KP22	176 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	GGTA1P	Q4G0N0	100 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	FAM120AOS	Q5T036	256 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	TTC23	Q5W5X9	447 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.12	□□□□□ -1.91
RDX-208	ENST00000530085	KIAA1328	Q86T90	577 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	SLC47A2	Q86VL8	602 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	IFNE	Q86WN2	208 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	ZNF683	Q8IZ20	524 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	SLC38A6	Q8IZM9	456 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	SLC22A18AS	Q8N1D0	253 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	FGFRL1	Q8N441	504 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	OR6T1	Q8NGN1	323 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	M1AP	Q8TC57	530 aa		3.12	□□□□□ -1.91
RDX-208	ENST00000530085	RASL10A	Q92737	203 aa		3.12	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms