RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 COX20Q5RI15 118 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 BICRALQ6AI39 1079 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 ZAR1Q86SH2 424 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 TREML1Q86YW5 311 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 COX18Q8N8Q8 333 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 ZFP62Q8NB50 900 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-222ENST00000520948 OR52N2Q8NGI0 321 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 RP9Q8TA86 221 aaKnown RBP16.59■□□□□ 0.25
VEGFA-222ENST00000520948 JADE3Q92613 823 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 TMCO6Q96DC7 493 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 FRMD6Q96NE9 622 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 SDF2Q99470 211 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 FAM173AQ9BQD7 235 aa16.59■□□□□ 0.25
VEGFA-222ENST00000520948 OTOGQ6ZRI0 2925 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 LOC100653049A0A140TA62 436 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 PRAMEF27A3QJZ7 478 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 ANGPT2O15123 496 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 TRIM3O75382 744 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-222ENST00000520948 KRT34O76011 436 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 AGR2O95994 175 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 GUSBP08236 651 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 DNASE1L1P49184 302 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 MEOX1P50221 254 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 GAS1P54826 345 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 GPR85P60893 370 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 RNFT1Q5M7Z0 435 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 TBCELQ5QJ74 424 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 DCST2Q5T1A1 773 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 CCNJQ5T5M9 372 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 PRAMEF20Q5VT98 475 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 TNFAIP8L2Q6P589 184 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-222ENST00000520948 FIGNL1Q6PIW4 674 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 BNC2Q6ZN30 1099 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-222ENST00000520948 SNX32Q86XE0 403 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 ZNF808Q8N4W9 903 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-222ENST00000520948 XAGE5Q8WWM1 108 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 RAB8BQ92930 207 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 G6PC3Q9BUM1 346 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 FLRT3Q9NZU0 649 aa16.58■□□□□ 0.24
VEGFA-222ENST00000520948 BBIP1A8MTZ0 92 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 G3V3Y1 287 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 ICOSLGO75144 302 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 SNX4O95219 450 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 AK1P00568 194 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 COX4I1P13073 169 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 GPX2P18283 190 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 KHKP50053 298 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 RBPJQ06330 500 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 FUT5Q11128 374 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 STX5Q13190 355 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 CYLC2Q14093 348 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-222ENST00000520948 RGNQ15493 299 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 MAPK11Q15759 364 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 HYAL4Q2M3T9 481 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.57■□□□□ 0.241e-7■□□□□ 10.9
VEGFA-222ENST00000520948 FNDC7Q5VTL7 733 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 GDF7Q7Z4P5 450 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 POGLUT1Q8NBL1 392 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 FAM98AQ8NCA5 519 aaKnown RBP16.57■□□□□ 0.24
VEGFA-222ENST00000520948 OR4C3Q8NH37 302 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 PNPT1Q8TCS8 783 aaKnown RBP16.57■□□□□ 0.24
VEGFA-222ENST00000520948 SAP130Q9H0E3 1048 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 TSPAN10Q9H1Z9 355 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-222ENST00000520948 EXD2Q9NVH0 621 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 TUBA8Q9NY65 449 aaPredicted RBP16.57■□□□□ 0.24
VEGFA-222ENST00000520948 NINQ8N4C6 2090 aa16.57■□□□□ 0.24
VEGFA-222ENST00000520948 NPIPB9F8W1W9 429 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 SLC19A2O60779 497 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 GLSO94925 669 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-222ENST00000520948 UTS2O95399 124 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 NPPAP01160 153 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 NGFRP08138 427 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 BMP2P12643 396 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 COX6B1P14854 86 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 TBXA2RP21731 343 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 C3AR1Q16581 482 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 ZNF630Q2M218 657 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-222ENST00000520948 GRAMD1BQ3KR37 738 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 GKAP1Q5VSY0 366 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-222ENST00000520948 MTFR2Q6P444 385 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 APOOLQ6UXV4 268 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 RPTNQ6XPR3 784 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 DHDDSQ86SQ9 333 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 GALNT10Q86SR1 603 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 TMEM41AQ96HV5 264 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 ANKRD27Q96NW4 1050 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 CGREF1Q99674 301 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 RTN4RQ9BZR6 473 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 IKZF5Q9H5V7 419 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 IL1RL2Q9HB29 575 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 TINAGQ9UJW2 476 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 ABCG2Q9UNQ0 655 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.56■□□□□ 0.24
VEGFA-222ENST00000520948 PDZD2O15018 2839 aa16.56■□□□□ 0.24
VEGFA-222ENST00000520948 PRAMEF25A6NGN4 478 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 FXYD1O00168 92 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 FCMRO60667 390 aa16.55■□□□□ 0.24
VEGFA-222ENST00000520948 TNFRSF21O75509 655 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms