RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CFLARO15519 480 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 SNNO75324 88 aaPredicted RBP11.69□□□□□ -0.54
HDAC1-209ENST00000484305 ANGPTL1O95841 491 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 PRIM2P49643 509 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 LHX2P50458 406 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 SLC18A1P54219 525 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 DSCR4P56555 118 aaPredicted RBP11.69□□□□□ -0.54
HDAC1-209ENST00000484305 HBA1P69905 142 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 TP53BP2Q13625 1128 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 LASP1Q14847 261 aaKnown RBP11.69□□□□□ -0.54
HDAC1-209ENST00000484305 SF3B4Q15427 424 aaKnown RBP eCLIP11.69□□□□□ -0.543e-30■■■■■ 77.6
HDAC1-209ENST00000484305 HSPB2Q16082 182 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 SLC25A35Q3KQZ1 300 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 LSM12Q3MHD2 195 aaKnown RBP11.69□□□□□ -0.54
HDAC1-209ENST00000484305 CCNJQ5T5M9 372 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 OR4F3Q6IEY1 312 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 AAGABQ6PD74 315 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 ZCCHC12Q6PEW1 402 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 ENPP6Q6UWR7 440 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 PLXDC2Q6UX71 529 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 GDF7Q7Z4P5 450 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 CAMKMTQ7Z624 323 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 NATD1Q8N6N6 113 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 COX18Q8N8Q8 333 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 ZPLD1Q8TCW7 415 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 CDS1Q92903 461 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 DTNBP1Q96EV8 351 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 SFXN2Q96NB2 322 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 TUBA1CQ9BQE3 449 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 G6PC3Q9BUM1 346 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 TBL1XR1Q9BZK7 514 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 CALHM2Q9HA72 323 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 GPATCH2Q9NW75 528 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 CREBBPQ92793 2442 aa11.69□□□□□ -0.54
HDAC1-209ENST00000484305 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 ALG1L2C9J202 215 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 H0Y3Z8 333 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 ANKRD28O15084 1053 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 GMFGO60234 142 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 OXSR1O95747 527 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 IL2RAP01589 272 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 ZNF708P17019 499 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 LBPP18428 481 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 HK1P19367 917 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 TBXA2RP21731 343 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 BMP5P22003 454 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CHMP24386 653 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 ZNF136P52737 540 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CLDN18P56856 261 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 POU6F2P78424 691 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 C17orf67Q0P5P2 114 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 RCAN2Q14206 197 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CASP8Q14790 479 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 SPDYE7PQ495Y7 208 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CDC73Q6P1J9 531 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 POMZP3Q6PJE2 187 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 ADGRE4PQ86SQ3 457 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CLECL1Q8IZS7 167 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 KIRREL3Q8IZU9 778 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 RELL2Q8NC24 303 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 OR56A1Q8NGH5 318 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 OR5AK3PQ8NH89 298 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CHMP6Q96FZ7 201 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 STACQ99469 402 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 BTBD2Q9BX70 525 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 ACTRT3Q9BYD9 372 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 DPY30Q9C005 99 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 PIGUQ9H490 435 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 PTGES2Q9H7Z7 377 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 DUSP22Q9NRW4 184 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 THAP1Q9NVV9 213 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 GIN1Q9NXP7 522 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 KCNE3Q9Y6H6 103 aa11.68□□□□□ -0.54
HDAC1-209ENST00000484305 CSMD1Q96PZ7 3565 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 CLCA1A8K7I4 914 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 SDHDO14521 159 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 NDUFB5O43674 189 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 NGFRP08138 427 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 AGFG1P52594 562 aaKnown RBP11.67□□□□□ -0.54
HDAC1-209ENST00000484305 DLX5P56178 289 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 PHC1P78364 1004 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 GANABQ14697 944 aaKnown RBP11.67□□□□□ -0.54
HDAC1-209ENST00000484305 RAET1LQ5VY80 246 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 DMRTC2Q8IXT2 367 aaPredicted RBP11.67□□□□□ -0.54
HDAC1-209ENST00000484305 LRRC34Q8IZ02 419 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 CLEC4FQ8N1N0 589 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 C9orf106Q8NAJ2 232 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 GATSQ8NAP1 163 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 OR8J2Q8NGG1 315 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 C1GALT1C1Q96EU7 318 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 MANSC1Q9H8J5 431 aa11.67□□□□□ -0.54
HDAC1-209ENST00000484305 NEUROD4Q9HD90 331 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms