RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SH2D4BQ5SQS7 431 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 UBAP2Q5T6F2 1119 aaKnown RBP15.47■□□□□ 0.07
HMGN1-209ENST00000463631 BEND4Q6ZU67 534 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 GPRIN3Q6ZVF9 776 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 MARCH3Q86UD3 253 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 APIPQ96GX9 242 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 PAFAH2Q99487 392 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 LMF2Q9BU23 707 aaKnown RBP15.47■□□□□ 0.07
HMGN1-209ENST00000463631 ACTR6Q9GZN1 396 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 HHATLQ9HCP6 504 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 ZNF180Q9UJW8 692 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 MCTS1Q9ULC4 181 aaKnown RBP15.47■□□□□ 0.07
HMGN1-209ENST00000463631 GRID1Q9ULK0 1009 aa15.47■□□□□ 0.07
HMGN1-209ENST00000463631 UPK1AO00322 258 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 EIF1AYO14602 144 aaKnown RBP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 ADAMDEC1O15204 470 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 ANGPTL1O95841 491 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 JUNP05412 331 aaKnown RBP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 NID1P14543 1247 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 HMOX2P30519 316 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 HTR6P50406 440 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 ZNF763Q0D2J5 394 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 ZNHIT3Q15649 155 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 CLEC12BQ2HXU8 276 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 CTU2Q2VPK5 515 aaKnown RBP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 TMEM107Q6UX40 140 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 STK32CQ86UX6 486 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 GTPBP8Q8N3Z3 284 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 OR10D3Q8NH80 312 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 METTL6Q8TCB7 284 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 PRRG4Q9BZD6 226 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 TBL1XR1Q9BZK7 514 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 DDX18Q9NVP1 670 aaKnown RBP15.46■□□□□ 0.07
HMGN1-209ENST00000463631 STK38LQ9Y2H1 464 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 GPR52Q9Y2T5 361 aa15.46■□□□□ 0.07
HMGN1-209ENST00000463631 A0A087WZY1 265 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 UQCRHLA0A096LP55 91 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 SERTM1A2A2V5 107 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 TTC36A6NLP5 189 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 SUPT7LO94864 414 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 UTS2O95399 124 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 ENO1P06733 434 aaKnown RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 ANXA4P09525 319 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 PSMA4P25789 261 aaKnown RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 NCBP2P52298 156 aaKnown RBP eCLIP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 ZNF844Q08AG5 666 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 VEZF1Q14119 521 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 UNC50Q53HI1 259 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 ZNF678Q5SXM1 525 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 LGSNQ5TDP6 509 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 APOOLQ6UXV4 268 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 WFDC8Q8IUA0 241 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 WDR75Q8IWA0 830 aaKnown RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 NANOS1Q8WY41 292 aaKnown RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 AKAP1Q92667 903 aaKnown RBP eCLIP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 HOXB13Q92826 284 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 TMEM237Q96Q45 408 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 EBPLQ9BY08 206 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 DMGDHQ9UI17 866 aaKnown RBP15.45■□□□□ 0.06
HMGN1-209ENST00000463631 CLEC4AQ9UMR7 237 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 LAMP3Q9UQV4 416 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 RNF115Q9Y4L5 304 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 CADP27708 2225 aa15.45■□□□□ 0.06
HMGN1-209ENST00000463631 SHISA8B8ZZ34 492 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 TRIM49D1C9J1S8 452 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 ALG1L2C9J202 215 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 RNF223E7ERA6 249 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 TLX2O43763 284 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-209ENST00000463631 THBS1P07996 1170 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 NGFRP08138 427 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 DANCRP0C864 163 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 AGTR1P30556 359 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 NTSP30990 170 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 LCP2Q13094 533 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 PRSS53Q2L4Q9 553 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 DNM1P46Q6ZS02 220 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 EXOC3L1Q86VI1 746 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 STEAP2Q8NFT2 490 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 ZBTB8AQ96BR9 441 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 ELP4Q96EB1 424 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 AMDHD1Q96NU7 426 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 REG4Q9BYZ8 158 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 CDC42EP4Q9H3Q1 356 aaKnown RBP15.44■□□□□ 0.06
HMGN1-209ENST00000463631 C3orf14Q9HBI5 128 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 MYNNQ9NPC7 610 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 MIEF1Q9NQG6 463 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 VDAC3Q9Y277 283 aa15.44■□□□□ 0.06
HMGN1-209ENST00000463631 WBP11Q9Y2W2 641 aaKnown RBP15.44■□□□□ 0.06
HMGN1-209ENST00000463631 CCDC151A5D8V7 595 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 KCNH1O95259 989 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 SYNGR4O95473 234 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 TUBBP07437 444 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 TAC1P20366 129 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 PKNOX1P55347 436 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 RAC1P63000 192 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 GRAMD1BQ3KR37 738 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 FAM71E1Q6IPT2 247 aa15.43■□□□□ 0.06
HMGN1-209ENST00000463631 PPP4R4Q6NUP7 873 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms